FFCP PHASE1:Hg19::chr6:50786479..50786490,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:50786479..50786490,+
|short_description=p6@TFAP2B
|description=CAGE_peak_6_at_TFAP2B_5end
|association_with_transcript=40bp_to_ENST00000263046,NM_003221,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7021 | |EntrezGene=7021 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11743 | |HGNC=11743 | ||
|TSSclassifier=strong | |||
|UniProt=Q92481 | |UniProt=Q92481 | ||
|association_with_transcript=40bp_to_ENST00000263046,NM_003221,uc003pag.2_5end | |||
|cluster_id=chr6:50786479..50786490,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_6_at_TFAP2B_5end | |||
|id=chr6:50786479..50786490,+ | |||
|ontology_enrichment_celltype=CL:0002367!6.84e-09!2;CL:0000242!4.59e-08!2;CL:0002552!7.30e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002367;8.57e-32;2!CL:0000222;1.93e-16;1!CL:0000342;1.93e-16;1!CL:0002550;1.93e-16;1!CL:0002565;1.93e-16;1!CL:0000333;2.03e-13;5!CL:0000197;4.84e-11;6!CL:0000098;4.84e-11;6!CL:0002167;4.84e-11;6!CL:0002321;7.33e-10;15!CL:0000123;6.93e-09;2!CL:0000242;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002367,7.33e-32,2;CL:0002550,1.93e-16,1;CL:0000342,3.07e-16,1;CL:0002565,3.07e-16,1;CL:0000197,3.75e-11,6;CL:0000098,3.75e-11,6;CL:0002167,3.75e-11,6;CL:0000242,7.49e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;4.72e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.34e-14;10!DOID:169;2.43e-11;6!DOID:3193;3.71e-09;2!DOID:962;3.71e-09;2!DOID:3095;6.10e-07;22!DOID:2994;6.10e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.41e-14,10;DOID:169,2.36e-11,6;DOID:3193,3.71e-09,2;DOID:962,3.71e-09,2;DOID:3095,6.22e-07,22;DOID:2994,6.22e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001444!1.13e-09!48;UBERON:0005969!6.84e-09!2;UBERON:0003956!6.84e-09!2;UBERON:0000970!3.14e-08!20;UBERON:0002104!8.71e-08!21;UBERON:0002148!1.90e-07!2;UBERON:0009662!1.90e-07!2;UBERON:0000924!2.78e-07!173;UBERON:0006601!2.78e-07!173;UBERON:0000020!5.12e-07!23;UBERON:0004121!8.85e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;8.57e-32;2!UBERON:0003956;8.57e-32;2!UBERON:0002203;1.34e-23;6!UBERON:0001768;1.34e-23;6!UBERON:0002200;1.34e-23;6!UBERON:0002506;1.93e-16;1!UBERON:0001769;1.93e-16;1!UBERON:0000013;2.03e-13;5!UBERON:0002410;2.03e-13;5!UBERON:0006876;3.48e-13;11!UBERON:0001801;1.73e-10;14!UBERON:0003714;3.71e-09;2!UBERON:0000019;7.11e-08;19!UBERON:0000047;7.11e-08;19!UBERON:0004088;7.11e-08;19!UBERON:0010230;7.11e-08;19!UBERON:0000010;7.38e-08;8!UBERON:0000970;1.66e-07;20!UBERON:0002104;3.57e-07;21!UBERON:0001456;3.57e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,7.33e-32,2;UBERON:0003956,7.33e-32,2;UBERON:0002203,1.57e-23,6;UBERON:0001768,1.57e-23,6;UBERON:0002200,1.57e-23,6;UBERON:0002506,3.07e-16,1;UBERON:0001769,3.07e-16,1;UBERON:0000013,1.97e-13,5;UBERON:0002410,1.97e-13,5;UBERON:0006876,3.79e-13,11;UBERON:0001801,1.84e-10,14;UBERON:0003714,3.71e-09,2;UBERON:0005085,3.03e-08,31;UBERON:0000010,7.25e-08,8;UBERON:0000019,1.73e-07,20;UBERON:0000047,1.73e-07,20;UBERON:0010312,1.73e-07,20;UBERON:0004088,1.73e-07,20;UBERON:0010230,1.73e-07,20;UBERON:0003072,1.73e-07,20;UBERON:0004128,1.73e-07,20;UBERON:0003071,1.73e-07,20;UBERON:0000970,3.72e-07,21;UBERON:0002104,3.72e-07,21;UBERON:0001456,7.47e-07,22 | |||
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| ||
|short_description=p6@TFAP2B | |||
}} | }} |
Latest revision as of 05:19, 19 September 2015
Short description: | p6@TFAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TFAP2B_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 40bp_to_ENST00000263046, NM_003221, uc003pag.2_5end |
EntrezGene: | TFAP2B |
HGNC: | 11743 |
UniProt: | Q92481 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trabecular meshwork cell | 7.33e-32 | 2 |
fibroblast of the conjuctiva | 1.93e-16 | 1 |
pigment cell (sensu Vertebrata) | 3.07e-16 | 1 |
iris pigment epithelial cell | 3.07e-16 | 1 |
receptor cell | 3.75e-11 | 6 |
sensory epithelial cell | 3.75e-11 | 6 |
olfactory epithelial cell | 3.75e-11 | 6 |
Merkel cell | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 7.33e-32 | 2 |
aqueous drainage system | 7.33e-32 | 2 |
vasculature of eye | 1.57e-23 | 6 |
uvea | 1.57e-23 | 6 |
vasculature of head | 1.57e-23 | 6 |
iris epithelium | 3.07e-16 | 1 |
iris | 3.07e-16 | 1 |
sympathetic nervous system | 1.97e-13 | 5 |
autonomic nervous system | 1.97e-13 | 5 |
vasculature of organ | 3.79e-13 | 11 |
anterior segment of eyeball | 1.84e-10 | 14 |
neural tissue | 3.71e-09 | 2 |
ectodermal placode | 3.03e-08 | 31 |
peripheral nervous system | 7.25e-08 | 8 |
camera-type eye | 1.73e-07 | 20 |
simple eye | 1.73e-07 | 20 |
immature eye | 1.73e-07 | 20 |
ocular region | 1.73e-07 | 20 |
eyeball of camera-type eye | 1.73e-07 | 20 |
optic cup | 1.73e-07 | 20 |
optic vesicle | 1.73e-07 | 20 |
eye primordium | 1.73e-07 | 20 |
eye | 3.72e-07 | 21 |
visual system | 3.72e-07 | 21 |
face | 7.47e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.41e-14 | 10 |
neuroendocrine tumor | 2.36e-11 | 6 |
peripheral nerve sheath neoplasm | 3.71e-09 | 2 |
neurofibroma | 3.71e-09 | 2 |
germ cell and embryonal cancer | 6.22e-07 | 22 |
germ cell cancer | 6.22e-07 | 22 |