FFCP PHASE1:Hg19::chr3:58523104..58523127,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:58523104..58523127,-
|short_description=p7@ACOX2
|description=CAGE_peak_7_at_ACOX2_5end
|association_with_transcript=-58bp_to_ENST00000302819_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8309 | |EntrezGene=8309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=120 | |HGNC=120 | ||
|TSSclassifier=strong | |||
|UniProt=Q99424 | |UniProt=Q99424 | ||
|association_with_transcript=-58bp_to_ENST00000302819_5end | |||
|cluster_id=chr3:58523104..58523127,- | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_7_at_ACOX2_5end | |||
|id=chr3:58523104..58523127,- | |||
|ontology_enrichment_celltype=CL:0000181!3.95e-09!12;CL:0000417!3.95e-09!12;CL:0000668!3.95e-09!12;CL:0000414!3.95e-09!12;CL:0000412!3.95e-09!12;CL:0000182!3.95e-09!12;CL:0002620!3.59e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.78e-41;12!CL:0000228;5.16e-21;1!CL:0002372;5.16e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.79e-41,12;CL:0000228,3.45e-21,1;CL:0002372,3.45e-21,1;CL:0000223,1.08e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.90e-17;11!UBERON:0009497;2.12e-14;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.14e-09!115;UBERON:0002107!1.02e-08!19;UBERON:0006925!1.02e-08!19;UBERON:0008836!1.02e-08!19;UBERON:0009497!1.19e-07!25;UBERON:0000015!1.19e-07!25;UBERON:0002423!1.19e-07!25;UBERON:0006235!1.19e-07!25;UBERON:0004161!1.19e-07!25;UBERON:0003929!1.26e-07!54;UBERON:0008835!2.92e-07!22;UBERON:0003894!2.92e-07!22;UBERON:0005057!4.75e-07!26;UBERON:0009854!7.32e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.35e-26;19!UBERON:0006925;3.35e-26;19!UBERON:0002423;5.61e-20;25!UBERON:0002108;5.90e-17;4!UBERON:0002365;1.54e-15;31!UBERON:0002330;1.54e-15;31!UBERON:0002368;1.53e-14;33!UBERON:0000949;7.04e-11;43!UBERON:0000160;1.32e-10;17!UBERON:0005409;1.98e-08;22!UBERON:0001007;3.84e-08;81!UBERON:0002417;9.48e-08;58!UBERON:0000916;9.48e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.36e-26,19;UBERON:0006925,3.36e-26,19;UBERON:0008836,3.36e-26,19;UBERON:0008835,1.15e-22,22;UBERON:0003894,1.15e-22,22;UBERON:0009854,1.08e-21,23;UBERON:0007499,5.61e-20,25;UBERON:0009497,5.61e-20,25;UBERON:0000015,5.61e-20,25;UBERON:0002423,5.61e-20,25;UBERON:0006235,5.61e-20,25;UBERON:0004161,5.61e-20,25;UBERON:0009856,3.22e-19,26;UBERON:0002108,5.91e-17,4;UBERON:0002365,3.74e-16,31;UBERON:0002330,3.74e-16,31;UBERON:0002368,2.50e-14,35;UBERON:0000949,3.55e-11,45;UBERON:0000160,1.28e-10,17;UBERON:0004921,2.40e-10,118;UBERON:0003929,2.49e-09,54;UBERON:0005172,2.49e-09,54;UBERON:0005173,2.49e-09,54;UBERON:0002530,1.51e-08,59;UBERON:0002417,2.10e-08,60;UBERON:0000916,2.10e-08,60;UBERON:0001007,2.37e-08,145;UBERON:0001555,2.37e-08,145;UBERON:0007026,2.37e-08,145;UBERON:0005409,1.56e-07,25;UBERON:0004119,1.57e-07,160;UBERON:0000925,1.57e-07,160;UBERON:0006595,1.57e-07,160 | |||
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| ||
|short_description=p7@ACOX2 | |||
}} | }} |
Latest revision as of 05:51, 19 September 2015
Short description: | p7@ACOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ACOX2_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | -58bp_to_ENST00000302819_5end |
EntrezGene: | ACOX2 |
HGNC: | 120 |
UniProt: | Q99424 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.79e-41 | 12 |
multinucleate cell | 3.45e-21 | 1 |
myotube | 3.45e-21 | 1 |
endodermal cell | 1.08e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.36e-26 | 19 |
digestive gland | 3.36e-26 | 19 |
liver bud | 3.36e-26 | 19 |
hepatic diverticulum | 1.15e-22 | 22 |
liver primordium | 1.15e-22 | 22 |
digestive tract diverticulum | 1.08e-21 | 23 |
epithelial sac | 5.61e-20 | 25 |
epithelium of foregut-midgut junction | 5.61e-20 | 25 |
anatomical boundary | 5.61e-20 | 25 |
hepatobiliary system | 5.61e-20 | 25 |
foregut-midgut junction | 5.61e-20 | 25 |
septum transversum | 5.61e-20 | 25 |
sac | 3.22e-19 | 26 |
small intestine | 5.91e-17 | 4 |
exocrine gland | 3.74e-16 | 31 |
exocrine system | 3.74e-16 | 31 |
endocrine gland | 2.50e-14 | 35 |
endocrine system | 3.55e-11 | 45 |
intestine | 1.28e-10 | 17 |
subdivision of digestive tract | 2.40e-10 | 118 |
gut epithelium | 2.49e-09 | 54 |
abdomen element | 2.49e-09 | 54 |
abdominal segment element | 2.49e-09 | 54 |
gland | 1.51e-08 | 59 |
abdominal segment of trunk | 2.10e-08 | 60 |
abdomen | 2.10e-08 | 60 |
digestive system | 2.37e-08 | 145 |
digestive tract | 2.37e-08 | 145 |
primitive gut | 2.37e-08 | 145 |
gastrointestinal system | 1.56e-07 | 25 |
endoderm-derived structure | 1.57e-07 | 160 |
endoderm | 1.57e-07 | 160 |
presumptive endoderm | 1.57e-07 | 160 |