FFCP PHASE1:Hg19::chr3:100551141..100551152,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25890 | |EntrezGene=25890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17265 | |HGNC=17265 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000478235_5end | |association_with_transcript=0bp_to_ENST00000478235_5end | ||
|cluster_id=chr3:100551141..100551152,- | |||
|coexpression_cluster_id=C404 | |||
|description=CAGE_peak_14_at_ABI3BP_5end | |description=CAGE_peak_14_at_ABI3BP_5end | ||
|id=chr3:100551141..100551152,- | |id=chr3:100551141..100551152,- | ||
|ontology_enrichment_celltype=CL:0000569!1.58e-08!4;CL:0000011!1.58e-08!4 | |ontology_enrichment_celltype=CL:0000569!1.58e-08!4;CL:0000011!1.58e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000153;1.67e-22;9!CL:0000447;1.67e-22;9!CL:0000214;8.03e-18;3!CL:0000511;9.12e-14;1!CL:0002625;9.12e-14;1!CL:0000216;9.12e-14;1!CL:0002591;9.12e-14;1!CL:0000327;1.24e-13;15!CL:0000569;2.21e-13;4!CL:0000138;3.14e-09;6!CL:0000499;2.10e-07;28!CL:0000151;6.99e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.73e-22,9;CL:0000447,1.73e-22,9;CL:0000214,8.40e-18,3;CL:0000511,4.53e-14,1;CL:0002625,4.53e-14,1;CL:0000216,4.53e-14,1;CL:0000327,1.27e-13,15;CL:0002591,1.61e-13,1;CL:0000569,1.62e-13,4;CL:0000011,1.62e-13,4;CL:0000058,3.14e-09,6;CL:0000138,3.14e-09,6;CL:0000151,1.14e-08,36;CL:0000499,2.12e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000011;2.21e-13;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;9.12e-14;1!DOID:3451;1.59e-07;2!DOID:4159;1.59e-07;2!DOID:0060122;1.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,6.65e-14,1;DOID:3451,1.36e-07,2;DOID:4159,1.36e-07,2;DOID:0060122,1.36e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;8.03e-18;3!UBERON:0007616;8.03e-18;3!UBERON:0002217;8.03e-18;3!UBERON:0002018;8.03e-18;3!UBERON:0002146;9.12e-14;1!UBERON:0001136;9.12e-14;1!UBERON:0001343;9.12e-14;1!UBERON:0005623;9.12e-14;1!UBERON:0004910;9.12e-14;1!UBERON:0004813;9.12e-14;1!UBERON:0000078;1.59e-07;2!UBERON:0004909;1.59e-07;2!UBERON:0002012;1.59e-07;2!UBERON:0008886;1.59e-07;2!UBERON:0004905;3.00e-07;8!UBERON:0000982;3.00e-07;8!UBERON:0004770;3.00e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,8.40e-18,3;UBERON:0007616,8.40e-18,3;UBERON:0002217,8.40e-18,3;UBERON:0002018,8.40e-18,3;UBERON:0001136,4.53e-14,1;UBERON:0001343,4.53e-14,1;UBERON:0004910,4.53e-14,1;UBERON:0005154,4.53e-14,1;UBERON:0005295,4.53e-14,1;UBERON:0004813,4.53e-14,1;UBERON:0005297,4.53e-14,1;UBERON:0005294,4.53e-14,1;UBERON:0010141,4.53e-14,1;UBERON:0005891,4.53e-14,1;UBERON:0002146,5.15e-14,1;UBERON:0005623,5.15e-14,1;UBERON:0000948,1.41e-08,24;UBERON:0005498,1.41e-08,24;UBERON:0004140,1.41e-08,24;UBERON:0009881,1.41e-08,24;UBERON:0004141,1.41e-08,24;UBERON:0003084,1.41e-08,24;UBERON:0007005,1.41e-08,24;UBERON:0004139,1.41e-08,24;UBERON:0004291,1.41e-08,24;UBERON:0004797,4.12e-08,7;UBERON:0004909,1.12e-07,2;UBERON:0007100,1.21e-07,27;UBERON:0000078,2.12e-07,2;UBERON:0007497,2.12e-07,2;UBERON:0003643,2.12e-07,2;UBERON:0003504,2.12e-07,2;UBERON:0003469,2.12e-07,2;UBERON:0003496,2.12e-07,2;UBERON:0002012,2.12e-07,2;UBERON:0008886,2.12e-07,2;UBERON:0007303,2.12e-07,2;UBERON:0002061,2.12e-07,2;UBERON:0005432,2.12e-07,2;UBERON:0004363,2.12e-07,2;UBERON:0004905,3.05e-07,8;UBERON:0000982,3.05e-07,8;UBERON:0004770,3.05e-07,8 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0,1.01392563272577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0.993943903390637,0,1.32409180813219,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.751190294532984,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0.892144943985809,0.788512075169673,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328508624055237,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0.15350367472613,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0.62962469366128,0,0.924100740528266,0,0,0,0,0,0,0,0,0.42793898803392,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,1.26664581178598,4.61012850143863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,1.55519793830904,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,1.60412296808179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0.251567901752575,0.889811221596536,1.60188047877847,1.51230923763239,0.15543720058278,0.147855149989634,0,0,0,1.24411862352257,0.265841714557995,0.521745061811734,0,0,0,0,0.214821114084977,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0.358177682162975,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,1.0580536810308,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.224263725161227,0,0.808468755832877,0,0,0,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0,1.01392563272577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0.993943903390637,0,1.32409180813219,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.751190294532984,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0.892144943985809,0.788512075169673,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328508624055237,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0.15350367472613,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0.62962469366128,0,0.924100740528266,0,0,0,0,0,0,0,0,0.42793898803392,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,1.26664581178598,4.61012850143863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,1.55519793830904,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,1.60412296808179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0.251567901752575,0.889811221596536,1.60188047877847,1.51230923763239,0.15543720058278,0.147855149989634,0,0,0,1.24411862352257,0.265841714557995,0.521745061811734,0,0,0,0,0.214821114084977,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0.358177682162975,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,1.0580536810308,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.224263725161227,0,0.808468755832877,0,0,0,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | ||
|short_description=p14@ABI3BP | |short_description=p14@ABI3BP | ||
}} | }} |
Latest revision as of 05:51, 19 September 2015
Short description: | p14@ABI3BP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ABI3BP_5end |
Coexpression cluster: | C404_Fibroblast_mesenchymal_Synoviocyte_Smooth_basal_mesodermal_Chondrocyte |
Association with transcript: | 0bp_to_ENST00000478235_5end |
EntrezGene: | ABI3BP |
HGNC: | 17265 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.73e-22 | 9 |
carbohydrate secreting cell | 1.73e-22 | 9 |
synovial cell | 8.40e-18 | 3 |
androgen binding protein secreting cell | 4.53e-14 | 1 |
seminiferous tubule epithelial cell | 4.53e-14 | 1 |
Sertoli cell | 4.53e-14 | 1 |
extracellular matrix secreting cell | 1.27e-13 | 15 |
smooth muscle cell of the pulmonary artery | 1.61e-13 | 1 |
cardiac mesenchymal cell | 1.62e-13 | 4 |
migratory trunk neural crest cell | 1.62e-13 | 4 |
chondroblast | 3.14e-09 | 6 |
chondrocyte | 3.14e-09 | 6 |
secretory cell | 1.14e-08 | 36 |
stromal cell | 2.12e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 6.65e-14 | 1 |
skin carcinoma | 1.36e-07 | 2 |
skin cancer | 1.36e-07 | 2 |
integumentary system cancer | 1.36e-07 | 2 |