FFCP PHASE1:Hg19::chr3:100551141..100551152,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:100551141..100551152,-
|short_description=p14@ABI3BP
|description=CAGE_peak_14_at_ABI3BP_5end
|association_with_transcript=0bp_to_ENST00000478235_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25890 | |EntrezGene=25890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17265 | |HGNC=17265 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000478235_5end | |||
|cluster_id=chr3:100551141..100551152,- | |||
|coexpression_cluster_id=C404 | |||
|description=CAGE_peak_14_at_ABI3BP_5end | |||
|id=chr3:100551141..100551152,- | |||
|ontology_enrichment_celltype=CL:0000569!1.58e-08!4;CL:0000011!1.58e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.67e-22;9!CL:0000447;1.67e-22;9!CL:0000214;8.03e-18;3!CL:0000511;9.12e-14;1!CL:0002625;9.12e-14;1!CL:0000216;9.12e-14;1!CL:0002591;9.12e-14;1!CL:0000327;1.24e-13;15!CL:0000569;2.21e-13;4!CL:0000138;3.14e-09;6!CL:0000499;2.10e-07;28!CL:0000151;6.99e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.73e-22,9;CL:0000447,1.73e-22,9;CL:0000214,8.40e-18,3;CL:0000511,4.53e-14,1;CL:0002625,4.53e-14,1;CL:0000216,4.53e-14,1;CL:0000327,1.27e-13,15;CL:0002591,1.61e-13,1;CL:0000569,1.62e-13,4;CL:0000011,1.62e-13,4;CL:0000058,3.14e-09,6;CL:0000138,3.14e-09,6;CL:0000151,1.14e-08,36;CL:0000499,2.12e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000011;2.21e-13;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;9.12e-14;1!DOID:3451;1.59e-07;2!DOID:4159;1.59e-07;2!DOID:0060122;1.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,6.65e-14,1;DOID:3451,1.36e-07,2;DOID:4159,1.36e-07,2;DOID:0060122,1.36e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;8.03e-18;3!UBERON:0007616;8.03e-18;3!UBERON:0002217;8.03e-18;3!UBERON:0002018;8.03e-18;3!UBERON:0002146;9.12e-14;1!UBERON:0001136;9.12e-14;1!UBERON:0001343;9.12e-14;1!UBERON:0005623;9.12e-14;1!UBERON:0004910;9.12e-14;1!UBERON:0004813;9.12e-14;1!UBERON:0000078;1.59e-07;2!UBERON:0004909;1.59e-07;2!UBERON:0002012;1.59e-07;2!UBERON:0008886;1.59e-07;2!UBERON:0004905;3.00e-07;8!UBERON:0000982;3.00e-07;8!UBERON:0004770;3.00e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,8.40e-18,3;UBERON:0007616,8.40e-18,3;UBERON:0002217,8.40e-18,3;UBERON:0002018,8.40e-18,3;UBERON:0001136,4.53e-14,1;UBERON:0001343,4.53e-14,1;UBERON:0004910,4.53e-14,1;UBERON:0005154,4.53e-14,1;UBERON:0005295,4.53e-14,1;UBERON:0004813,4.53e-14,1;UBERON:0005297,4.53e-14,1;UBERON:0005294,4.53e-14,1;UBERON:0010141,4.53e-14,1;UBERON:0005891,4.53e-14,1;UBERON:0002146,5.15e-14,1;UBERON:0005623,5.15e-14,1;UBERON:0000948,1.41e-08,24;UBERON:0005498,1.41e-08,24;UBERON:0004140,1.41e-08,24;UBERON:0009881,1.41e-08,24;UBERON:0004141,1.41e-08,24;UBERON:0003084,1.41e-08,24;UBERON:0007005,1.41e-08,24;UBERON:0004139,1.41e-08,24;UBERON:0004291,1.41e-08,24;UBERON:0004797,4.12e-08,7;UBERON:0004909,1.12e-07,2;UBERON:0007100,1.21e-07,27;UBERON:0000078,2.12e-07,2;UBERON:0007497,2.12e-07,2;UBERON:0003643,2.12e-07,2;UBERON:0003504,2.12e-07,2;UBERON:0003469,2.12e-07,2;UBERON:0003496,2.12e-07,2;UBERON:0002012,2.12e-07,2;UBERON:0008886,2.12e-07,2;UBERON:0007303,2.12e-07,2;UBERON:0002061,2.12e-07,2;UBERON:0005432,2.12e-07,2;UBERON:0004363,2.12e-07,2;UBERON:0004905,3.05e-07,8;UBERON:0000982,3.05e-07,8;UBERON:0004770,3.05e-07,8 | |||
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| ||
|short_description=p14@ABI3BP | |||
}} | }} |
Latest revision as of 05:51, 19 September 2015
Short description: | p14@ABI3BP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ABI3BP_5end |
Coexpression cluster: | C404_Fibroblast_mesenchymal_Synoviocyte_Smooth_basal_mesodermal_Chondrocyte |
Association with transcript: | 0bp_to_ENST00000478235_5end |
EntrezGene: | ABI3BP |
HGNC: | 17265 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.73e-22 | 9 |
carbohydrate secreting cell | 1.73e-22 | 9 |
synovial cell | 8.40e-18 | 3 |
androgen binding protein secreting cell | 4.53e-14 | 1 |
seminiferous tubule epithelial cell | 4.53e-14 | 1 |
Sertoli cell | 4.53e-14 | 1 |
extracellular matrix secreting cell | 1.27e-13 | 15 |
smooth muscle cell of the pulmonary artery | 1.61e-13 | 1 |
cardiac mesenchymal cell | 1.62e-13 | 4 |
migratory trunk neural crest cell | 1.62e-13 | 4 |
chondroblast | 3.14e-09 | 6 |
chondrocyte | 3.14e-09 | 6 |
secretory cell | 1.14e-08 | 36 |
stromal cell | 2.12e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 6.65e-14 | 1 |
skin carcinoma | 1.36e-07 | 2 |
skin cancer | 1.36e-07 | 2 |
integumentary system cancer | 1.36e-07 | 2 |