FFCP PHASE1:Hg19::chr19:49575947..49575959,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3743 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6226 | |||
|TSSclassifier=strong | |||
|UniProt=Q96RP8 | |||
|association_with_transcript=238bp_to_ENST00000221444,NM_031886,uc002pmg.2_5end | |||
|cluster_id=chr19:49575947..49575959,- | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_1_at_KCNA7_5end | |||
|id=chr19:49575947..49575959,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;9.79e-26;1!UBERON:0008814;1.37e-13;2!UBERON:0010056;1.37e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.24e-19!2;UBERON:0001723!1.51e-13!3;UBERON:0001033!1.51e-13!3;UBERON:0010056!1.51e-13!3;UBERON:0004151!2.79e-13!3;UBERON:0002426!7.40e-11!1;UBERON:0003831!7.40e-11!1;UBERON:0003898!7.40e-11!1;UBERON:0004830!7.40e-11!1;UBERON:0001774!7.40e-11!1;UBERON:0003830!7.40e-11!1;UBERON:0005175!7.40e-11!1;UBERON:0003897!7.40e-11!1;UBERON:0001103!7.40e-11!1;UBERON:0010084!7.40e-11!1;UBERON:0002079!1.19e-10!1;UBERON:0002084!1.57e-10!1;UBERON:0002082!1.57e-10!1;UBERON:0004706!1.57e-10!1;UBERON:0000989!1.89e-10!1;UBERON:0008811!1.89e-10!1;UBERON:0006258!1.89e-10!1;UBERON:0005876!1.89e-10!1;UBERON:0004874!1.89e-10!1;UBERON:0002372!4.75e-10!1;UBERON:0001961!4.75e-10!1;UBERON:0001744!4.75e-10!1;UBERON:0001735!4.75e-10!1;UBERON:0008814!5.08e-10!15;UBERON:0001042!7.84e-09!10;UBERON:0009145!7.84e-09!10;UBERON:0002046!4.22e-08!5;UBERON:0004117!4.22e-08!5;UBERON:0007689!4.22e-08!5;UBERON:0007123!4.22e-08!5;UBERON:0003091!4.22e-08!5;UBERON:0006562!4.51e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;7.50e-50;2!UBERON:0001723;6.51e-34;3!UBERON:0001033;6.51e-34;3!UBERON:0002426;2.78e-26;1!UBERON:0003831;2.78e-26;1!UBERON:0003898;2.78e-26;1!UBERON:0004830;2.78e-26;1!UBERON:0003830;2.78e-26;1!UBERON:0005175;2.78e-26;1!UBERON:0001774;2.78e-26;1!UBERON:0001103;2.78e-26;1!UBERON:0002079;9.79e-26;1!UBERON:0000974;2.10e-17;6!UBERON:0001134;1.03e-14;16!UBERON:0002036;1.03e-14;16!UBERON:0005090;7.30e-14;2!UBERON:0001630;7.30e-14;2!UBERON:0002081;1.37e-13;2!UBERON:0004151;1.67e-09;3!UBERON:0002385;3.69e-08;31!UBERON:0001015;3.69e-08;31!UBERON:0000383;3.69e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,8.50e-50,2;UBERON:0001723,5.51e-34,3;UBERON:0001033,5.51e-34,3;UBERON:0010056,5.51e-34,3;UBERON:0002426,2.78e-26,1;UBERON:0003831,2.78e-26,1;UBERON:0003898,2.78e-26,1;UBERON:0004830,2.78e-26,1;UBERON:0003830,2.78e-26,1;UBERON:0005175,2.78e-26,1;UBERON:0001774,2.78e-26,1;UBERON:0001103,2.78e-26,1;UBERON:0010084,2.78e-26,1;UBERON:0002079,9.79e-26,1;UBERON:0005090,7.30e-14,2;UBERON:0001630,7.30e-14,2;UBERON:0002081,1.37e-13,2;UBERON:0010227,1.37e-13,2;UBERON:0001042,5.98e-11,10;UBERON:0009145,5.98e-11,10;UBERON:0000974,7.67e-11,10;UBERON:0006562,4.83e-10,11;UBERON:0004151,1.67e-09,3;UBERON:0000153,8.26e-07,62;UBERON:0007811,8.26e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81546588379273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,3.2852098193999,2.3196288626764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,2.34557380091079,1.1903221573187,0,0,0,0.12729431655633,0.404234377916439,1.74173398317569,7.52913262387618,0.0673520530145875,0,0.99798106963804,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@KCNA7 | |||
}} |
Latest revision as of 06:07, 19 September 2015
Short description: | p1@KCNA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNA7_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 238bp_to_ENST00000221444, NM_031886, uc002pmg.2_5end |
EntrezGene: | KCNA7 |
HGNC: | 6226 |
UniProt: | Q96RP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 8.50e-50 | 2 |
tongue | 5.51e-34 | 3 |
gustatory system | 5.51e-34 | 3 |
future tongue | 5.51e-34 | 3 |
chest muscle | 2.78e-26 | 1 |
respiratory system muscle | 2.78e-26 | 1 |
skeletal muscle of trunk | 2.78e-26 | 1 |
respiratory system skeletal muscle | 2.78e-26 | 1 |
thoracic segment muscle | 2.78e-26 | 1 |
chest organ | 2.78e-26 | 1 |
muscle of trunk | 2.78e-26 | 1 |
diaphragm | 2.78e-26 | 1 |
future diaphragm | 2.78e-26 | 1 |
left cardiac atrium | 9.79e-26 | 1 |
muscle structure | 7.30e-14 | 2 |
muscle organ | 7.30e-14 | 2 |
cardiac atrium | 1.37e-13 | 2 |
future cardiac atrium | 1.37e-13 | 2 |
chordate pharynx | 5.98e-11 | 10 |
pharyngeal region of foregut | 5.98e-11 | 10 |
neck | 7.67e-11 | 10 |
pharynx | 4.83e-10 | 11 |
cardiac chamber | 1.67e-09 | 3 |
anterior region of body | 8.26e-07 | 62 |
craniocervical region | 8.26e-07 | 62 |