FFCP PHASE1:Hg19::chr3:61728802..61728813,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:61728802..61728813,-
|short_description=p1@RPL10AP6
|description=CAGE_peak_1_at_RPL10AP6_5end
|association_with_transcript=-22bp_to_ENST00000472730_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=36504 | |HGNC=36504 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000472730_5end | |||
|cluster_id=chr3:61728802..61728813,- | |||
|coexpression_cluster_id=C4341 | |||
|description=CAGE_peak_1_at_RPL10AP6_5end | |||
|id=chr3:61728802..61728813,- | |||
|ontology_enrichment_celltype=CL:0000838!1.97e-13!52;CL:0000542!2.50e-13!53;CL:0000051!2.50e-13!53;CL:0000144!1.18e-07!625;CL:0000945!1.70e-07!24;CL:0000826!1.70e-07!24;CL:0000012!1.74e-07!682;CL:0000084!3.57e-07!25;CL:0000827!3.57e-07!25;CL:0000791!3.66e-07!18;CL:0000789!3.66e-07!18;CL:0002420!3.66e-07!18;CL:0002419!3.66e-07!18;CL:0000790!3.66e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;7.96e-09;53!CL:0000945;1.69e-07;24!CL:0000236;3.20e-07;13!CL:0000791;3.67e-07;18!CL:0000789;3.67e-07;18!CL:0002419;3.67e-07;18!CL:0000084;3.68e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.97e-13,52;CL:0000542,2.50e-13,53;CL:0000051,2.50e-13,53;CL:0000945,1.70e-07,24;CL:0000826,1.70e-07,24;CL:0000084,3.57e-07,25;CL:0000827,3.57e-07,25;CL:0000791,3.66e-07,18;CL:0000789,3.66e-07,18;CL:0002420,3.66e-07,18;CL:0002419,3.66e-07,18;CL:0000790,3.66e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;7.96e-09;53!CL:0000790;3.67e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@RPL10AP6 | |||
}} | }} |
Latest revision as of 07:45, 19 September 2015
Short description: | p1@RPL10AP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL10AP6_5end |
Coexpression cluster: | C4341_CD8_CD4_CD133_CD19_CD34_skeletal_neuroectodermal |
Association with transcript: | -22bp_to_ENST00000472730_5end |
EntrezGene: | NA |
HGNC: | 36504 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.97e-13 | 52 |
lymphocyte | 2.50e-13 | 53 |
common lymphoid progenitor | 2.50e-13 | 53 |
lymphocyte of B lineage | 1.70e-07 | 24 |
pro-B cell | 1.70e-07 | 24 |
T cell | 3.57e-07 | 25 |
pro-T cell | 3.57e-07 | 25 |
mature alpha-beta T cell | 3.66e-07 | 18 |
alpha-beta T cell | 3.66e-07 | 18 |
immature T cell | 3.66e-07 | 18 |
mature T cell | 3.66e-07 | 18 |
immature alpha-beta T cell | 3.66e-07 | 18 |