FFCP PHASE1:Hg19::chr8:86290333..86290348,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=759 | |EntrezGene=759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1368 | |HGNC=1368 | ||
|TSSclassifier=strong | |||
|UniProt=E5RII2,E5RH81,E5RHS7,E5RJI8,E5RJF6,E5RG43,E5RFL2,E5RIF9,E5RGU8,E5RFE7,P00915 | |UniProt=E5RII2,E5RH81,E5RHS7,E5RJI8,E5RJF6,E5RG43,E5RFL2,E5RIF9,E5RGU8,E5RFE7,P00915 | ||
|association_with_transcript=0bp_to_ENST00000517429,ENST00000517590,ENST00000518341,ENST00000519129,ENST00000519991,ENST00000520093,ENST00000520663,ENST00000520990,ENST00000521846,ENST00000522579,ENST00000522662,ENST00000522814,ENST00000523022,ENST00000523858,ENST00000524324,NM_001128829,NM_001128830,NM_001128831,NM_001738_5end | |association_with_transcript=0bp_to_ENST00000517429,ENST00000517590,ENST00000518341,ENST00000519129,ENST00000519991,ENST00000520093,ENST00000520663,ENST00000520990,ENST00000521846,ENST00000522579,ENST00000522662,ENST00000522814,ENST00000523022,ENST00000523858,ENST00000524324,NM_001128829,NM_001128830,NM_001128831,NM_001738_5end | ||
|cluster_id=chr8:86290333..86290348,- | |||
|coexpression_cluster_id=C212 | |||
|description=CAGE_peak_1_at_CA1_5end | |description=CAGE_peak_1_at_CA1_5end | ||
|id=chr8:86290333..86290348,- | |id=chr8:86290333..86290348,- | ||
|ontology_enrichment_celltype=CL:0000763!2.13e-09!112;CL:0000049!2.13e-09!112 | |ontology_enrichment_celltype=CL:0000763!2.13e-09!112;CL:0000049!2.13e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000775;2.02e-07;3!CL:0000226;6.26e-07;3!CL:0000842;6.26e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.47e-09,108;CL:0000049,4.47e-09,108;CL:0000775,1.94e-07,3;CL:0000226,5.04e-07,3;CL:0000842,5.04e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.75e-08;7 | |||
|ontology_enrichment_disease=DOID:1036!5.93e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.77e-11;8!DOID:8692;1.87e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.77e-11,8;DOID:8692,1.86e-10,31;DOID:1240,1.15e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.24e-64!115;UBERON:0001049!6.44e-16!57;UBERON:0005068!6.44e-16!57;UBERON:0006241!6.44e-16!57;UBERON:0007135!6.44e-16!57;UBERON:0000178!3.73e-13!15;UBERON:0000179!3.73e-13!15;UBERON:0000463!3.73e-13!15;UBERON:0003075!2.76e-12!86;UBERON:0007284!2.76e-12!86;UBERON:0002616!4.93e-12!59;UBERON:0002346!2.98e-11!90;UBERON:0003080!2.15e-10!42;UBERON:0001017!2.24e-10!82;UBERON:0005743!2.79e-10!86;UBERON:0002780!9.89e-10!41;UBERON:0001890!9.89e-10!41;UBERON:0006240!9.89e-10!41;UBERON:0000955!1.23e-09!69;UBERON:0006238!1.23e-09!69;UBERON:0002308!5.93e-09!9;UBERON:0000125!5.93e-09!9;UBERON:0001893!1.40e-08!34;UBERON:0002298!1.52e-08!8;UBERON:0002390!1.66e-08!102;UBERON:0003061!1.66e-08!102;UBERON:0002020!1.68e-08!34;UBERON:0003528!1.68e-08!34;UBERON:0000073!2.12e-08!94;UBERON:0001016!2.12e-08!94;UBERON:0002791!5.09e-08!33;UBERON:0002193!5.83e-08!112;UBERON:0009663!2.57e-07!7;UBERON:0001869!3.95e-07!32;UBERON:0003076!4.08e-07!15;UBERON:0003057!4.08e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.17e-22;15!UBERON:0000179;9.17e-22;15!UBERON:0000463;9.17e-22;15!UBERON:0002390;8.52e-15;32!UBERON:0004151;7.02e-08;3!UBERON:0007023;2.44e-07;114!UBERON:0002193;2.62e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.24e-23,114;UBERON:0000178,7.65e-22,15;UBERON:0000179,7.65e-22,15;UBERON:0000463,7.65e-22,15;UBERON:0002390,5.57e-08,98;UBERON:0003061,5.57e-08,98;UBERON:0004151,7.72e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0,0,0,1.46800219667424,0,0.200544447470142,0,0.447830948479849,0.647787332037959,0,0.436194716338694,0,0,1.16214518452842,0.822335776043652,0,0.863077176966451,0,0.47296445977717,3.10271112662957,0,0,1.31769637679823,0.545812300115692,0,2.44867113896722,0.320929027076094,0,0.329851300186716,0,0,3.77272010217159,1.70215567407342,1.24564449799115,0.75374599577023,0,0.217188844705117,2.42159801053347,1.47311054395026,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0,0,0,0,1.32208974556972,0,0,0,0,3.96513985737078,14.5732226375199,198.854984005183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87979051674338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24702107184155,2.99161459204025,10.3603878359009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92859249633486,1.94142780736755,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,974.829411567825,719.731796671551,0,0,0,16.692643886931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7346163545791,0,0,0,0,1153.42841578472,1248.6525592635,681.298035860298,209.405730627397,205.681136543097,1018.75157188376,1272.85409757024,575.80887798964,0,0,0,0,0,0,0,0,0,0,0,0,3.19528550646469,0,0,0,0,0,0,0,0,0,0,0,202.679694595736,1259.1840912351,1.35227839237992,1.33228787199128,545.619709689978,0,2.3441308683503,0,0,0,0.47748896947538,0,0,0,0,0,0,0,5.18044769452781,0.276283915531148,0,0,0.123084805461069,0,0,0,0,6.21453455512682,402.331595142859,0,0,1.02044907978036,0,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,0.241192877250816,1.52581736317083,0.221158519862449,0,1.31631238292384,0,0,0.153900517007594,0,0,0,0,0.638002319463839,0,0,0,0,1529.81232020904,17.3708658675229,30.3896928192496,30.7113504165792,175.90171023532,5050.05086052255,0,0,0,0,0,0.353830258013357,7.33236173920351,0,0,0,2.42644078730437,1.60515529459758,0,0,0,0,0,0,2.44858209304392,15.1015925312086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16386819786103,0,7.90932592731864,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,2.23425921017803,0.458320848023367,26.5613019093421,0.399358000997982,0.429226048136571,14.2829732762798,5.50904474391155,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.485996453264197,0,0.0788057072991982,4.98318587282482,0,0,0,2.1440859791201,37.0771503404642,0,0,0,0,0,390.267843642357,0,0,1.90517903781507,30.4765844498109,0.387848869084652,0.79339561045614,0,0,57.2380531362843,11.4759142722756,1.65695622138878,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0.500763722825999,0.573409195690071,0.332787154610557,1.4903136705932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.159633859057151,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,1.50420656698514,0,0.781514011233092,0,0,0,0.337687923091973,0,0.620060389503552,0.380494861163441,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0,0.606965604236632,0.227662191351298,30.6023177061104,0,0,0.475788130837822,0.394636641377094,0,0,1.96232732126285,0.314231179832004,0,0,0,0,4.36006919477604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51716350167487,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0.981542335574726,0.297046400327086,0.4226557275834,0,6.4848903406099,100.167557910939,0,0,0,0,1.46067277649303,0,1.72007499781742,0,0.203974470572744,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,122.609539593064,0,0.322944549180031,5.64879900092307,0,9.67436805828106,0.606351566874658,0,0.342233301085281,0.404112318087525,8.82183126329919,0,0,0,0,0,0,0.366724332548599,0,21.9699735481219,0.402547587182052,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0,0,0,1.46800219667424,0,0.200544447470142,0,0.447830948479849,0.647787332037959,0,0.436194716338694,0,0,1.16214518452842,0.822335776043652,0,0.863077176966451,0,0.47296445977717,3.10271112662957,0,0,1.31769637679823,0.545812300115692,0,2.44867113896722,0.320929027076094,0,0.329851300186716,0,0,3.77272010217159,1.70215567407342,1.24564449799115,0.75374599577023,0,0.217188844705117,2.42159801053347,1.47311054395026,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0,0,0,0,1.32208974556972,0,0,0,0,3.96513985737078,14.5732226375199,198.854984005183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87979051674338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24702107184155,2.99161459204025,10.3603878359009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92859249633486,1.94142780736755,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,974.829411567825,719.731796671551,0,0,0,16.692643886931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7346163545791,0,0,0,0,1153.42841578472,1248.6525592635,681.298035860298,209.405730627397,205.681136543097,1018.75157188376,1272.85409757024,575.80887798964,0,0,0,0,0,0,0,0,0,0,0,0,3.19528550646469,0,0,0,0,0,0,0,0,0,0,0,202.679694595736,1259.1840912351,1.35227839237992,1.33228787199128,545.619709689978,0,2.3441308683503,0,0,0,0.47748896947538,0,0,0,0,0,0,0,5.18044769452781,0.276283915531148,0,0,0.123084805461069,0,0,0,0,6.21453455512682,402.331595142859,0,0,1.02044907978036,0,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,0.241192877250816,1.52581736317083,0.221158519862449,0,1.31631238292384,0,0,0.153900517007594,0,0,0,0,0.638002319463839,0,0,0,0,1529.81232020904,17.3708658675229,30.3896928192496,30.7113504165792,175.90171023532,5050.05086052255,0,0,0,0,0,0.353830258013357,7.33236173920351,0,0,0,2.42644078730437,1.60515529459758,0,0,0,0,0,0,2.44858209304392,15.1015925312086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16386819786103,0,7.90932592731864,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,2.23425921017803,0.458320848023367,26.5613019093421,0.399358000997982,0.429226048136571,14.2829732762798,5.50904474391155,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.485996453264197,0,0.0788057072991982,4.98318587282482,0,0,0,2.1440859791201,37.0771503404642,0,0,0,0,0,390.267843642357,0,0,1.90517903781507,30.4765844498109,0.387848869084652,0.79339561045614,0,0,57.2380531362843,11.4759142722756,1.65695622138878,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0.500763722825999,0.573409195690071,0.332787154610557,1.4903136705932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.159633859057151,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,1.50420656698514,0,0.781514011233092,0,0,0,0.337687923091973,0,0.620060389503552,0.380494861163441,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0,0.606965604236632,0.227662191351298,30.6023177061104,0,0,0.475788130837822,0.394636641377094,0,0,1.96232732126285,0.314231179832004,0,0,0,0,4.36006919477604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51716350167487,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0.981542335574726,0.297046400327086,0.4226557275834,0,6.4848903406099,100.167557910939,0,0,0,0,1.46067277649303,0,1.72007499781742,0,0.203974470572744,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,122.609539593064,0,0.322944549180031,5.64879900092307,0,9.67436805828106,0.606351566874658,0,0.342233301085281,0.404112318087525,8.82183126329919,0,0,0,0,0,0,0.366724332548599,0,21.9699735481219,0.402547587182052,0 | ||
|short_description=p1@CA1 | |short_description=p1@CA1 | ||
}} | }} |
Latest revision as of 07:50, 19 September 2015
Short description: | p1@CA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CA1_5end |
Coexpression cluster: | C212_chronic_acute_Whole_Reticulocytes_leukemia_blood_CD34 |
Association with transcript: | 0bp_to_ENST00000517429, ENST00000517590, ENST00000518341, ENST00000519129, ENST00000519991, ENST00000520093, ENST00000520663, ENST00000520990, ENST00000521846, ENST00000522579, ENST00000522662, ENST00000522814, ENST00000523022, ENST00000523858, ENST00000524324, NM_001128829, NM_001128830, NM_001128831, NM_001738_5end |
EntrezGene: | CA1 |
HGNC: | 1368 |
UniProt: | E5RII2E5RH81E5RHS7E5RJI8E5RJF6E5RG43E5RFL2E5RIF9E5RGU8E5RFE7P00915 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.47e-09 | 108 |
common myeloid progenitor | 4.47e-09 | 108 |
neutrophil | 1.94e-07 | 3 |
single nucleate cell | 5.04e-07 | 3 |
mononuclear cell | 5.04e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.24e-23 | 114 |
blood | 7.65e-22 | 15 |
haemolymphatic fluid | 7.65e-22 | 15 |
organism substance | 7.65e-22 | 15 |
hematopoietic system | 5.57e-08 | 98 |
blood island | 5.57e-08 | 98 |
cardiac chamber | 7.72e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.77e-11 | 8 |
myeloid leukemia | 1.86e-10 | 31 |
leukemia | 1.15e-07 | 39 |