FFCP PHASE2:Hg19::chr1:186430270..186430273,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5132 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:8759 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=8759 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P20941 | ||
|association_with_transcript=-16bp_to_ENST00000391997_5end | |association_with_transcript=-16bp_to_ENST00000391997_5end | ||
|cluster_id=chr1:186430270..186430273,- | |cluster_id=chr1:186430270..186430273,- | ||
Latest revision as of 08:05, 19 September 2015
| Short description: | p2@PDC |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_PDC_5end |
| Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
| Association with transcript: | -16bp_to_ENST00000391997_5end |
| EntrezGene: | PDC |
| HGNC: | 8759 |
| UniProt: | P20941 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@PDC |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pineal body | 4.22e-98 | 2 |
| regional part of epithalamus | 4.22e-98 | 2 |
| secretory circumventricular organ | 4.22e-98 | 2 |
| circumventricular organ | 4.22e-98 | 2 |
| epithalamus | 4.22e-98 | 2 |
| gland of diencephalon | 8.47e-50 | 4 |
| neuroendocrine gland | 8.47e-50 | 4 |
| regional part of diencephalon | 8.47e-50 | 4 |
| diencephalon | 4.86e-29 | 7 |
| future diencephalon | 4.86e-29 | 7 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| lung small cell carcinoma | 8.82e-14 | 4 |
| bronchus cancer | 1.89e-08 | 7 |
| bronchogenic carcinoma | 1.89e-08 | 7 |
| lung carcinoma | 7.48e-07 | 9 |
Showing 1 to 4 of 4 entries
