FFCP PHASE1:Hg19::chr1:78510648..78510661,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54810 | |EntrezGene=54810 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18177 | |HGNC=18177 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_AK307422_5end | |||
|cluster_id=chr1:78510648..78510661,+ | |||
|coexpression_cluster_id=C784 | |||
|description=CAGE_peak_7_at_GIPC2_5end | |||
|id=chr1:78510648..78510661,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.48e-15!24;CL:0000115!9.11e-13!35;CL:0000071!1.53e-11!18;CL:0002546!1.53e-11!18;CL:0002618!6.71e-10!3;CL:0002078!1.99e-09!44;CL:1000413!5.34e-08!9;CL:0002543!5.42e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002618;6.72e-99;3!CL:0002543;4.94e-50;6!CL:0002139;1.68e-49;24!CL:0000071;5.77e-46;18!CL:0000115;1.72e-28;36!CL:1000413;1.31e-15;9!CL:0000213;6.64e-14;58!CL:0000215;6.64e-14;58!CL:0002078;2.52e-11;45!CL:0000076;2.94e-10;63!CL:0002544;8.72e-07;6!CL:0002138;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,4.06e-99,3;CL:0002543,3.84e-50,6;CL:0002139,1.68e-49,24;CL:0000071,5.02e-46,18;CL:0002546,5.02e-46,18;CL:0000115,3.07e-33,36;CL:0002078,1.01e-26,45;CL:0000213,7.29e-21,58;CL:0000215,7.29e-21,58;CL:1000413,1.31e-15,9;CL:0000076,1.37e-13,63;CL:0000222,3.06e-10,121;CL:0002544,8.97e-07,6;CL:0005020,9.49e-07,6;CL:0002138,9.49e-07,6;CL:0005022,9.49e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;5.77e-46;18!CL:0005022;8.72e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.47e-28!115;UBERON:0001986!1.53e-11!18;UBERON:0004638!1.53e-11!18;UBERON:0004852!1.53e-11!18;UBERON:0003978!2.78e-09!3;UBERON:0009751!2.78e-09!3;UBERON:0000946!2.78e-09!3;UBERON:0002523!2.78e-09!3;UBERON:0005983!2.78e-09!3;UBERON:0002165!2.78e-09!3;UBERON:0002062!2.78e-09!3;UBERON:0007280!2.78e-09!3;UBERON:0000487!4.35e-09!22;UBERON:0004111!1.26e-08!241;UBERON:0003915!5.34e-08!9;UBERON:0004700!5.34e-08!9;UBERON:0001917!5.34e-08!9;UBERON:0000477!6.57e-08!286;UBERON:0006914!9.06e-08!25;UBERON:0001638!1.09e-07!9;UBERON:0003920!1.09e-07!9;UBERON:0004582!1.09e-07!9;UBERON:0000055!1.16e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002066;8.15e-60;5!UBERON:0004638;5.77e-46;18!UBERON:0001986;5.77e-46;18!UBERON:0004852;5.77e-46;18!UBERON:0000487;9.55e-38;22!UBERON:0001638;1.05e-33;9!UBERON:0010260;1.05e-33;9!UBERON:0003920;1.05e-33;9!UBERON:0004582;1.05e-33;9!UBERON:0006914;2.65e-33;25!UBERON:0000490;2.46e-20;33!UBERON:0003915;1.31e-15;9!UBERON:0004700;1.31e-15;9!UBERON:0001917;1.31e-15;9!UBERON:0000055;4.88e-13;65!UBERON:0007500;2.56e-11;56!UBERON:0001981;2.56e-11;56!UBERON:0004537;2.56e-11;56!UBERON:0003914;6.36e-08;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002066,6.03e-60,5;UBERON:0004638,5.02e-46,18;UBERON:0001986,5.02e-46,18;UBERON:0004852,5.02e-46,18;UBERON:0000487,8.52e-38,22;UBERON:0001638,8.87e-34,9;UBERON:0010260,8.87e-34,9;UBERON:0003920,8.87e-34,9;UBERON:0004582,8.87e-34,9;UBERON:0006914,2.39e-33,25;UBERON:0000055,7.10e-18,68;UBERON:0002049,1.20e-15,78;UBERON:0007798,1.20e-15,78;UBERON:0003915,1.31e-15,9;UBERON:0004700,1.31e-15,9;UBERON:0001917,1.31e-15,9;UBERON:0007500,1.78e-14,59;UBERON:0001981,1.78e-14,59;UBERON:0004537,1.78e-14,59;UBERON:0006965,1.78e-14,59;UBERON:0004535,2.52e-11,109;UBERON:0001009,4.95e-11,112;UBERON:0004872,2.00e-10,83;UBERON:0003914,1.66e-07,117 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,1.04142150482278,0,0,0.550236083880135,1.25396979922086,0.258416759169329,0.71153252537342,1.00416183829401,0,0,0,0,0.81014194788176,3.39338967479503,3.14341121676638,1.57656072676651,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0.717873024576814,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.533937062838473,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0.122026264901963,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0.532214220975833,0,0,0,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0,0,0.4226557275834,0,0.281951753939561,0.515663103788617,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p7@GIPC2 | |||
}} | }} |
Latest revision as of 08:20, 19 September 2015
Short description: | p7@GIPC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GIPC2_5end |
Coexpression cluster: | C784_Endothelial_Lymphatic_Renal_placenta_Hepatic_chronic_acute |
Association with transcript: | 2bp_to_AK307422_5end |
EntrezGene: | GIPC2 |
HGNC: | 18177 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 4.06e-99 | 3 |
vein endothelial cell | 3.84e-50 | 6 |
endothelial cell of vascular tree | 1.68e-49 | 24 |
blood vessel endothelial cell | 5.02e-46 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.02e-46 | 18 |
endothelial cell | 3.07e-33 | 36 |
meso-epithelial cell | 1.01e-26 | 45 |
lining cell | 7.29e-21 | 58 |
barrier cell | 7.29e-21 | 58 |
endothelial cell of artery | 1.31e-15 | 9 |
squamous epithelial cell | 1.37e-13 | 63 |
mesodermal cell | 3.06e-10 | 121 |
aortic endothelial cell | 8.97e-07 | 6 |
lymphangioblast | 9.49e-07 | 6 |
endothelial cell of lymphatic vessel | 9.49e-07 | 6 |
vascular lymphangioblast | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
umbilical vein | 6.03e-60 | 5 |
blood vessel endothelium | 5.02e-46 | 18 |
endothelium | 5.02e-46 | 18 |
cardiovascular system endothelium | 5.02e-46 | 18 |
simple squamous epithelium | 8.52e-38 | 22 |
vein | 8.87e-34 | 9 |
umbilical blood vessel | 8.87e-34 | 9 |
venous blood vessel | 8.87e-34 | 9 |
venous system | 8.87e-34 | 9 |
squamous epithelium | 2.39e-33 | 25 |
vessel | 7.10e-18 | 68 |
vasculature | 1.20e-15 | 78 |
vascular system | 1.20e-15 | 78 |
endothelial tube | 1.31e-15 | 9 |
arterial system endothelium | 1.31e-15 | 9 |
endothelium of artery | 1.31e-15 | 9 |
epithelial tube open at both ends | 1.78e-14 | 59 |
blood vessel | 1.78e-14 | 59 |
blood vasculature | 1.78e-14 | 59 |
vascular cord | 1.78e-14 | 59 |
cardiovascular system | 2.52e-11 | 109 |
circulatory system | 4.95e-11 | 112 |
splanchnic layer of lateral plate mesoderm | 2.00e-10 | 83 |
epithelial tube | 1.66e-07 | 117 |