FFCP PHASE1:Hg19::chr4:89951028..89951062,-: Difference between revisions
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|id=chr4:89951028..89951062,-
|short_description=p20@FAM13A
|description=CAGE_peak_20_at_FAM13A_5end
|association_with_transcript=0bp_to_ENST00000506913_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10144 | |EntrezGene=10144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19367 | |HGNC=19367 | ||
|TSSclassifier=strong | |||
|UniProt=D6RGE4 | |UniProt=D6RGE4 | ||
|association_with_transcript=0bp_to_ENST00000506913_5end | |||
|cluster_id=chr4:89951028..89951062,- | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_20_at_FAM13A_5end | |||
|id=chr4:89951028..89951062,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.27e-10;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.89e-10;2!UBERON:0008947;2.03e-10;29!UBERON:0006965;2.49e-10;2 | |||
|ontology_enrichment_disease=DOID:1799!1.18e-07!1;DOID:10165!1.18e-07!1;DOID:1798!1.18e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.44e-14!2;UBERON:0003127!1.54e-14!2;UBERON:0002148!1.44e-13!2;UBERON:0009662!1.44e-13!2;UBERON:0002298!6.63e-13!8;UBERON:0007023!7.66e-13!115;UBERON:0001896!1.71e-09!3;UBERON:0005290!1.71e-09!3;UBERON:0010096!1.71e-09!3;UBERON:0000988!2.41e-09!3;UBERON:0006331!2.41e-09!3;UBERON:0004733!1.18e-08!12;UBERON:0002028!1.18e-08!12;UBERON:0007277!1.18e-08!12;UBERON:0001301!3.10e-08!1;UBERON:0002171!3.80e-08!1;UBERON:0006518!3.80e-08!1;UBERON:0008949!3.80e-08!1;UBERON:0000101!3.80e-08!1;UBERON:0002167!3.80e-08!1;UBERON:0004732!5.37e-08!13;UBERON:0006834!1.35e-07!1;UBERON:0003076!6.07e-07!15;UBERON:0003057!6.07e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;9.84e-37;2!UBERON:0001301;1.56e-19;1!UBERON:0002171;2.71e-19;1!UBERON:0006518;2.71e-19;1!UBERON:0008949;2.71e-19;1!UBERON:0000101;2.71e-19;1!UBERON:0002167;2.71e-19;1!UBERON:0000974;5.76e-13;6!UBERON:0003127;1.57e-10;2!UBERON:0002048;4.44e-08;22!UBERON:0000117;4.44e-08;22!UBERON:0000171;4.44e-08;22!UBERON:0000170;4.44e-08;22!UBERON:0006947;2.19e-07;3!UBERON:0004054;2.19e-07;3!UBERON:0005178;2.84e-07;34!UBERON:0002224;2.84e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,8.20e-37,2;UBERON:0001301,1.30e-19,1;UBERON:0002171,2.25e-19,1;UBERON:0006518,2.25e-19,1;UBERON:0008949,2.25e-19,1;UBERON:0000101,2.25e-19,1;UBERON:0002167,2.25e-19,1;UBERON:0003127,1.57e-10,2;UBERON:0005178,6.25e-09,34;UBERON:0002224,6.25e-09,34;UBERON:0005181,1.10e-08,35;UBERON:0000974,3.63e-08,10;UBERON:0002048,4.44e-08,22;UBERON:0000117,4.44e-08,22;UBERON:0000171,4.44e-08,22;UBERON:0000170,4.44e-08,22;UBERON:0005597,4.44e-08,22;UBERON:0000118,4.44e-08,22;UBERON:0008947,5.10e-08,38;UBERON:0003258,5.10e-08,38;UBERON:0007023,1.97e-07,114;UBERON:0006947,2.05e-07,3;UBERON:0004054,2.05e-07,3 | |||
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|short_description=p20@FAM13A | |||
}} | }} |
Latest revision as of 08:21, 19 September 2015
Short description: | p20@FAM13A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_FAM13A_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 0bp_to_ENST00000506913_5end |
EntrezGene: | FAM13A |
HGNC: | 19367 |
UniProt: | D6RGE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 8.20e-37 | 2 |
epididymis | 1.30e-19 | 1 |
lower lobe of right lung | 2.25e-19 | 1 |
right lung lobe | 2.25e-19 | 1 |
lower lobe of lung | 2.25e-19 | 1 |
lobe of lung | 2.25e-19 | 1 |
right lung | 2.25e-19 | 1 |
open tracheal system trachea | 1.57e-10 | 2 |
thoracic cavity element | 6.25e-09 | 34 |
thoracic cavity | 6.25e-09 | 34 |
thoracic segment organ | 1.10e-08 | 35 |
neck | 3.63e-08 | 10 |
lung | 4.44e-08 | 22 |
respiratory tube | 4.44e-08 | 22 |
respiration organ | 4.44e-08 | 22 |
pair of lungs | 4.44e-08 | 22 |
lung primordium | 4.44e-08 | 22 |
lung bud | 4.44e-08 | 22 |
respiratory primordium | 5.10e-08 | 38 |
endoderm of foregut | 5.10e-08 | 38 |
adult organism | 1.97e-07 | 114 |
male genital duct | 2.05e-07 | 3 |
internal male genitalia | 2.05e-07 | 3 |