FFCP PHASE1:Hg19::chr4:90815997..90816012,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:90815997..90816012,+
|short_description=p1@MMRN1
|description=CAGE_peak_1_at_MMRN1_5end
|association_with_transcript=0bp_to_uc010iku.2_5end
|EntrezGene=22...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22915 | |EntrezGene=22915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7178 | |HGNC=7178 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010iku.2_5end | |||
|cluster_id=chr4:90815997..90816012,+ | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_1_at_MMRN1_5end | |||
|id=chr4:90815997..90816012,+ | |||
|ontology_enrichment_celltype=CL:0002139!7.25e-26!24;CL:0000115!6.92e-20!35;CL:0000071!1.45e-19!18;CL:0002546!1.45e-19!18;CL:0002078!2.60e-14!44;CL:1000413!1.65e-10!9;CL:0000213!1.35e-08!57;CL:0000215!1.35e-08!57;CL:0005020!7.53e-08!6;CL:0002138!7.53e-08!6;CL:0005022!7.53e-08!6;CL:0002543!1.02e-07!6;CL:0002544!1.44e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.54e-34;24!CL:0000071;1.26e-25;18!CL:0000115;1.03e-23;36!CL:0002078;1.36e-13;45!CL:1000413;1.65e-13;9!CL:0002138;5.74e-10;6!CL:0002543;8.60e-10;6!CL:0002544;1.38e-09;6!CL:0000213;1.46e-08;58!CL:0000215;1.46e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.54e-34,24;CL:0000115,4.93e-28,36;CL:0000071,1.25e-25,18;CL:0002546,1.25e-25,18;CL:0002078,2.92e-20,45;CL:1000413,1.63e-13,9;CL:0000213,1.86e-13,58;CL:0000215,1.86e-13,58;CL:0005020,5.77e-10,6;CL:0002138,5.77e-10,6;CL:0005022,5.77e-10,6;CL:0002543,8.63e-10,6;CL:0002544,1.36e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.26e-25;18!CL:0005022;5.74e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.17e-50!115;UBERON:0001986!1.45e-19!18;UBERON:0004638!1.45e-19!18;UBERON:0004852!1.45e-19!18;UBERON:0000487!1.49e-14!22;UBERON:0006914!5.36e-13!25;UBERON:0001009!9.11e-12!113;UBERON:0004111!5.92e-11!241;UBERON:0004535!1.23e-10!110;UBERON:0003915!1.65e-10!9;UBERON:0004700!1.65e-10!9;UBERON:0001917!1.65e-10!9;UBERON:0000025!1.75e-09!194;UBERON:0000477!3.33e-09!286;UBERON:0001049!9.60e-09!57;UBERON:0005068!9.60e-09!57;UBERON:0006241!9.60e-09!57;UBERON:0007135!9.60e-09!57;UBERON:0000055!7.95e-08!69;UBERON:0003080!3.85e-07!42;UBERON:0002465!6.34e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.26e-25;18!UBERON:0001986;1.26e-25;18!UBERON:0004852;1.26e-25;18!UBERON:0000487;1.03e-19;22!UBERON:0006914;1.52e-16;25!UBERON:0003915;1.65e-13;9!UBERON:0004700;1.65e-13;9!UBERON:0001917;1.65e-13;9!UBERON:0000490;3.11e-10;33!UBERON:0007023;7.10e-10;114!UBERON:0002465;3.83e-09;10!UBERON:0001638;4.65e-08;9!UBERON:0003920;4.65e-08;9!UBERON:0004582;4.65e-08;9!UBERON:0002193;1.30e-07;42!UBERON:0001473;4.03e-07;8!UBERON:0004536;4.03e-07;8!UBERON:0006558;4.03e-07;8!UBERON:0000055;4.99e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.24e-40,114;UBERON:0004638,1.25e-25,18;UBERON:0001986,1.25e-25,18;UBERON:0004852,1.25e-25,18;UBERON:0000487,1.03e-19,22;UBERON:0006914,1.52e-16,25;UBERON:0001009,6.60e-15,112;UBERON:0004535,4.65e-14,109;UBERON:0003915,1.63e-13,9;UBERON:0004700,1.63e-13,9;UBERON:0001917,1.63e-13,9;UBERON:0000055,6.07e-12,68;UBERON:0002049,3.43e-09,78;UBERON:0007798,3.43e-09,78;UBERON:0002465,4.10e-09,10;UBERON:0004872,4.36e-09,83;UBERON:0004111,7.49e-09,240;UBERON:0007500,2.80e-08,59;UBERON:0001981,2.80e-08,59;UBERON:0004537,2.80e-08,59;UBERON:0006965,2.80e-08,59;UBERON:0001638,4.73e-08,9;UBERON:0003920,4.73e-08,9;UBERON:0004582,4.73e-08,9;UBERON:0001473,4.04e-07,8;UBERON:0004536,4.04e-07,8;UBERON:0006558,4.04e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.656804715599566,0.550975469195755,0,2.30297638858328,0.154816123316076,0,0,0,0.154934401160603,0,16.4416246027514,0,0,0,1.34349284543955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,1.72425731986345,0,0.954053754535364,0.569212969109448,0,0.764546456250458,7.93027971474155,2.80254281490768,12.9058201539788,0,0.393010762749165,0.205601498999509,2.50779743086017,0.32592226663359,0.946895611469467,0,0.557052284425868,0.294605907474837,0.221533894583621,0.541607727530031,0,0.260118695119756,0.657751618414705,0.552700035571697,1.15921234294021,0,0.267540828089713,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0.301150238155546,0,1.24930726552346,0.710331756132051,0,0,0,0,0,0.670700859703636,1.40648818027883,0,0,0,0,0,0,0,0.43917392846563,1.37528029272598,0,0,0,0,0,0.953962497221368,2.28797964312051,1.11437250398869,124.425267011557,86.0234595106124,35.4083311639746,153.763760203331,80.5438917523019,32.463928948928,98.0186393057642,277.022765829521,318.055038841919,294.888859845674,27.392393563422,303.348570181687,60.527390271946,56.2524512929179,37.2665296025609,324.247313399494,149.536562169029,143.016580213819,50.5944903637415,94.9265659568129,59.357365033452,1.31780417436063,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0.933633106199299,2.15537075311501,1.30769522490767,0,0,0,0,16.543682824789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680593098960126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0.982827216677626,5.90789906681404,0,0,0,0,0,0,0,0,0,0,0,0,107.408637134239,64.8179717607255,314.109605339322,0,0,0,0,0,0,0,0,0,0,1.15014803749563,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0.749007023947182,0,5.38740167466846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,1.36074964221213,28.5009009254824,1.54227252690289,0,0,0,0,0,3.94667777962682,2.0914836081992,0,0,0,24.3176787488625,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78841148289775,0,0,0,0,0,0.422215270595328,0,0,0,0,0.670302275535787,0,24.3832444011858,0,0,0,0,8.11916174771471,4.58782324285425,11.3929437434833,10.0057345692271,10.6954191002411,3.8908398671563,7.02040868409549,12.6900028207083,1.70918513803957,0,0,0,0,0,0,1.1974762285969,9.95827924688307,42.3347165447766,0.649243880549111,1.96558024679421,0,0,0,30.4725200042886,0,0,0,0,0,0,0,0,11.4146531297049,1.23087398947712,21.6364542780786,29.9764771198038,0,0,8.35096621849796,0,0,0,0.23874448473769,0,0,0.994147647766298,1.96937182974718,0,0,0,4.38345574152353,6.3545300572164,0.251932747854276,0,0,0,0,0,0,21.8988360513993,7.18449277040819,0,0.969332746095218,0.74214478529481,0,0,0,11.5999932069567,0,0,0,0,0.291604613383254,0,0,1.08536794762867,0,0.331737779793674,0,1.31631238292384,0,0,25.2396847892454,0,0,0,0,23.2870846604301,0,43.708851633528,0,147.875401524113,3.49044531990328,0,0,0,0,18.9134528986651,0,0,0,0,1.99052386215701,17.8684280296745,21.9970852176105,0,0,0,0.404406797884062,13.6438200040794,0.937057782901357,0,0,0,8.2862724598372,13.308978765353,0.91821828489147,30.9614240179591,0,0,0,0,0,0,0,0,0,0,0,12.2308667769421,0,0,0,0,20.5616714955449,0,14.2367866691735,0,0,0.316553979779393,0,0,8.96502577905281,0,0,8.47570811627776,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,5.58564802544508,1.14580212005842,3.58936512288407,0.798716001995964,2.57535628881943,7.14148663813992,8.73385142327441,0,0,0,0,0,0,0,0,2.04305109167363,0,0,0,0.2249738915515,0,0.182248669974074,0,3.70386824306231,1.62609223218494,0,0,0,6.4322579373603,2.64836788146173,0,0,0,0,0,0.492555124496034,0,0,8.06037285229453,6.62534444561107,0.387848869084652,1.71902382265497,0,0,34.9194839096362,12.4191401028736,3.72815149812476,37.2124516358963,0,0,0,0,1.2534494701135,0,0,0,0,0.122026264901963,1.752673029891,0.573409195690071,3.66065870071613,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07387654227596,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.27707087245721,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,9.62692202870493,0,0.781514011233092,0,0,0,0.405225507710368,0,1.03343398250592,0.126831620387814,0.546974809018219,2.19303106742873,17.3673912436253,0,0,1.60710550763486,4.03540466662589,1.21393120847326,1.82129753081038,34.5052219932665,0.460935950223117,0,0.543757863814654,0.131545547125698,0,0,10.5965675348194,0.157115589916002,0,11.8710633666234,0,0,4.00268647389276,0,1.51113852978563,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,1.2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| ||
|short_description=p1@MMRN1 | |||
}} | }} |
Latest revision as of 08:55, 19 September 2015
Short description: | p1@MMRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MMRN1_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | 0bp_to_uc010iku.2_5end |
EntrezGene: | MMRN1 |
HGNC: | 7178 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.54e-34 | 24 |
endothelial cell | 4.93e-28 | 36 |
blood vessel endothelial cell | 1.25e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.25e-25 | 18 |
meso-epithelial cell | 2.92e-20 | 45 |
endothelial cell of artery | 1.63e-13 | 9 |
lining cell | 1.86e-13 | 58 |
barrier cell | 1.86e-13 | 58 |
lymphangioblast | 5.77e-10 | 6 |
endothelial cell of lymphatic vessel | 5.77e-10 | 6 |
vascular lymphangioblast | 5.77e-10 | 6 |
vein endothelial cell | 8.63e-10 | 6 |
aortic endothelial cell | 1.36e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.24e-40 | 114 |
blood vessel endothelium | 1.25e-25 | 18 |
endothelium | 1.25e-25 | 18 |
cardiovascular system endothelium | 1.25e-25 | 18 |
simple squamous epithelium | 1.03e-19 | 22 |
squamous epithelium | 1.52e-16 | 25 |
circulatory system | 6.60e-15 | 112 |
cardiovascular system | 4.65e-14 | 109 |
endothelial tube | 1.63e-13 | 9 |
arterial system endothelium | 1.63e-13 | 9 |
endothelium of artery | 1.63e-13 | 9 |
vessel | 6.07e-12 | 68 |
vasculature | 3.43e-09 | 78 |
vascular system | 3.43e-09 | 78 |
lymphoid system | 4.10e-09 | 10 |
splanchnic layer of lateral plate mesoderm | 4.36e-09 | 83 |
anatomical conduit | 7.49e-09 | 240 |
epithelial tube open at both ends | 2.80e-08 | 59 |
blood vessel | 2.80e-08 | 59 |
blood vasculature | 2.80e-08 | 59 |
vascular cord | 2.80e-08 | 59 |
vein | 4.73e-08 | 9 |
venous blood vessel | 4.73e-08 | 9 |
venous system | 4.73e-08 | 9 |
lymphatic vessel | 4.04e-07 | 8 |
lymph vasculature | 4.04e-07 | 8 |
lymphatic part of lymphoid system | 4.04e-07 | 8 |