FFCP PHASE1:Hg19::chr15:80843472..80843480,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9915 | |EntrezGene=9915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16876 | |HGNC=16876 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_ENST00000558849_5end | |association_with_transcript=27bp_to_ENST00000558849_5end | ||
|cluster_id=chr15:80843472..80843480,+ | |||
|description=CAGE_peak_22_at_ARNT2_5end | |description=CAGE_peak_22_at_ARNT2_5end | ||
|id=chr15:80843472..80843480,+ | |id=chr15:80843472..80843480,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.15e-17!180;CL:0000183!3.28e-16!59;CL:0000680!3.87e-15!57;CL:0000056!3.87e-15!57;CL:0000355!3.87e-15!57;CL:0000187!6.54e-15!54;CL:0000393!8.86e-13!60;CL:0000211!8.86e-13!60;CL:0000192!1.41e-09!42;CL:0000514!1.41e-09!42;CL:1000306!5.47e-09!4;CL:0002547!5.47e-09!4;CL:0000057!1.61e-08!75;CL:0000708!2.63e-08!3;CL:0000222!4.66e-08!119;CL:0000188!1.14e-07!9;CL:0000048!1.72e-07!430;CL:0000723!3.66e-07!436;CL:0000034!9.61e-07!444 | |ontology_enrichment_celltype=CL:0000055!3.15e-17!180;CL:0000183!3.28e-16!59;CL:0000680!3.87e-15!57;CL:0000056!3.87e-15!57;CL:0000355!3.87e-15!57;CL:0000187!6.54e-15!54;CL:0000393!8.86e-13!60;CL:0000211!8.86e-13!60;CL:0000192!1.41e-09!42;CL:0000514!1.41e-09!42;CL:1000306!5.47e-09!4;CL:0002547!5.47e-09!4;CL:0000057!1.61e-08!75;CL:0000708!2.63e-08!3;CL:0000222!4.66e-08!119;CL:0000188!1.14e-07!9;CL:0000048!1.72e-07!430;CL:0000723!3.66e-07!436;CL:0000034!9.61e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000708;4.16e-55;3!CL:0002174;3.25e-19;1!CL:0002599;3.25e-19;1!CL:0000501;3.25e-19;1!CL:0000327;1.27e-11;15!CL:0002549;2.72e-10;2!CL:0002575;2.72e-10;2!CL:0000346;1.82e-07;3!CL:1000428;1.82e-07;3!CL:0000174;2.79e-07;3!CL:0002590;2.79e-07;3 | |ontology_enrichment_celltype_v019=CL:0000708;4.16e-55;3!CL:0002174;3.25e-19;1!CL:0002599;3.25e-19;1!CL:0000501;3.25e-19;1!CL:0000327;1.27e-11;15!CL:0002549;2.72e-10;2!CL:0002575;2.72e-10;2!CL:0000346;1.82e-07;3!CL:1000428;1.82e-07;3!CL:0000174;2.79e-07;3!CL:0002590;2.79e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000708,4.17e-55,3;CL:0002599,1.88e-19,1;CL:0002174,2.71e-19,1;CL:0000501,2.71e-19,1;CL:0000327,1.27e-11,15;CL:0002575,2.72e-10,2;CL:0002549,3.58e-10,2;CL:0000151,1.97e-08,36;CL:0000346,1.82e-07,3;CL:1000428,1.82e-07,3;CL:0002590,2.47e-07,3;CL:0000174,2.63e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!7.70e-07!5;DOID:450!7.70e-07!5;DOID:66!7.70e-07!5;DOID:423!7.70e-07!5;DOID:0080000!7.70e-07!5;DOID:11722!7.70e-07!5 | |ontology_enrichment_disease=DOID:17!7.70e-07!5;DOID:450!7.70e-07!5;DOID:66!7.70e-07!5;DOID:423!7.70e-07!5;DOID:0080000!7.70e-07!5;DOID:11722!7.70e-07!5 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.05e-13!61;UBERON:0002036!1.05e-13!61;UBERON:0003082!1.05e-13!61;UBERON:0004290!1.40e-13!70;UBERON:0002385!4.64e-13!63;UBERON:0001015!4.64e-13!63;UBERON:0000383!4.64e-13!63;UBERON:0000914!1.90e-11!83;UBERON:0002329!1.90e-11!83;UBERON:0003077!1.90e-11!83;UBERON:0003059!1.90e-11!83;UBERON:0007282!1.90e-11!83;UBERON:0009618!1.90e-11!83;UBERON:0007285!1.90e-11!83;UBERON:0000486!1.45e-10!82;UBERON:0000415!5.47e-09!4;UBERON:0007240!5.47e-09!4;UBERON:0005742!5.47e-09!4;UBERON:0005734!5.47e-09!4;UBERON:0004664!5.47e-09!4;UBERON:0004663!5.47e-09!4;UBERON:0000490!2.51e-08!138;UBERON:0003210!2.63e-08!3;UBERON:0005256!6.71e-08!143;UBERON:0000119!7.24e-08!312 | |ontology_enrichment_uberon=UBERON:0001134!1.05e-13!61;UBERON:0002036!1.05e-13!61;UBERON:0003082!1.05e-13!61;UBERON:0004290!1.40e-13!70;UBERON:0002385!4.64e-13!63;UBERON:0001015!4.64e-13!63;UBERON:0000383!4.64e-13!63;UBERON:0000914!1.90e-11!83;UBERON:0002329!1.90e-11!83;UBERON:0003077!1.90e-11!83;UBERON:0003059!1.90e-11!83;UBERON:0007282!1.90e-11!83;UBERON:0009618!1.90e-11!83;UBERON:0007285!1.90e-11!83;UBERON:0000486!1.45e-10!82;UBERON:0000415!5.47e-09!4;UBERON:0007240!5.47e-09!4;UBERON:0005742!5.47e-09!4;UBERON:0005734!5.47e-09!4;UBERON:0004664!5.47e-09!4;UBERON:0004663!5.47e-09!4;UBERON:0000490!2.51e-08!138;UBERON:0003210!2.63e-08!3;UBERON:0005256!6.71e-08!143;UBERON:0000119!7.24e-08!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0003210;4.16e-55;3!UBERON:0005284;2.70e-15;5!UBERON:0005629;2.72e-10;2!UBERON:0005358;2.72e-10;2!UBERON:0001886;2.72e-10;2!UBERON:0004086;2.72e-10;2!UBERON:0005282;2.72e-10;2!UBERON:0005281;2.72e-10;2!UBERON:0000412;1.82e-07;3!UBERON:0001992;1.82e-07;3!UBERON:0006876;1.84e-07;11!UBERON:0001043;2.79e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0003210;4.16e-55;3!UBERON:0005284;2.70e-15;5!UBERON:0005629;2.72e-10;2!UBERON:0005358;2.72e-10;2!UBERON:0001886;2.72e-10;2!UBERON:0004086;2.72e-10;2!UBERON:0005282;2.72e-10;2!UBERON:0005281;2.72e-10;2!UBERON:0000412;1.82e-07;3!UBERON:0001992;1.82e-07;3!UBERON:0006876;1.84e-07;11!UBERON:0001043;2.79e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,4.17e-55,3;UBERON:0005284,2.90e-15,5;UBERON:0005629,3.58e-10,2;UBERON:0005358,3.58e-10,2;UBERON:0001886,3.58e-10,2;UBERON:0004086,3.58e-10,2;UBERON:0005282,3.58e-10,2;UBERON:0005281,3.58e-10,2;UBERON:0000412,1.82e-07,3;UBERON:0001992,1.82e-07,3;UBERON:0006876,1.90e-07,11;UBERON:0001043,2.32e-07,3;UBERON:0009143,2.32e-07,3 | |||
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|short_description=p22@ARNT2 | |short_description=p22@ARNT2 | ||
}} | }} |
Latest revision as of 09:31, 19 September 2015
Short description: | p22@ARNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_ARNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_ENST00000558849_5end |
EntrezGene: | ARNT2 |
HGNC: | 16876 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 4.17e-55 | 3 |
smooth muscle cell of the esophagus | 1.88e-19 | 1 |
follicular cell of ovary | 2.71e-19 | 1 |
granulosa cell | 2.71e-19 | 1 |
extracellular matrix secreting cell | 1.27e-11 | 15 |
central nervous system pericyte | 2.72e-10 | 2 |
fibroblast of choroid plexus | 3.58e-10 | 2 |
secretory cell | 1.97e-08 | 36 |
hair follicle dermal papilla cell | 1.82e-07 | 3 |
stem cell of epidermis | 1.82e-07 | 3 |
smooth muscle cell of the brain vasculature | 2.47e-07 | 3 |
steroid hormone secreting cell | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 4.17e-55 | 3 |
brain vasculature | 2.90e-15 | 5 |
vascular plexus | 3.58e-10 | 2 |
ventricle of nervous system | 3.58e-10 | 2 |
choroid plexus | 3.58e-10 | 2 |
brain ventricle | 3.58e-10 | 2 |
ventricular system of brain | 3.58e-10 | 2 |
ventricular system of central nervous system | 3.58e-10 | 2 |
dermal papilla | 1.82e-07 | 3 |
papillary layer of dermis | 1.82e-07 | 3 |
vasculature of organ | 1.90e-07 | 11 |
esophagus | 2.32e-07 | 3 |
esophageal region | 2.32e-07 | 3 |