FFCP PHASE1:Hg19::chr18:34408869..34408887,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:34408869..34408887,-
|short_description=p3@TPGS2
|description=CAGE_peak_3_at_TPGS2_5end
|association_with_transcript=52bp_to_ENST00000383056_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25941 | |EntrezGene=25941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24561 | |HGNC=24561 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_ENST00000383056_5end | |||
|cluster_id=chr18:34408869..34408887,- | |||
|description=CAGE_peak_3_at_TPGS2_5end | |||
|id=chr18:34408869..34408887,- | |||
|ontology_enrichment_celltype=CL:0000222!6.78e-26!119;CL:0000055!3.35e-18!180;CL:0002371!4.74e-17!591;CL:0000144!6.89e-17!625;CL:0002139!2.08e-15!24;CL:0000012!8.38e-15!682;CL:0000548!1.32e-14!679;CL:0000004!1.32e-14!679;CL:0000255!1.32e-14!679;CL:0000220!4.32e-14!246;CL:0000183!5.85e-14!59;CL:0000680!6.38e-14!57;CL:0000056!6.38e-14!57;CL:0000355!6.38e-14!57;CL:0000192!7.75e-14!42;CL:0000514!7.75e-14!42;CL:0002321!2.00e-13!248;CL:0000115!2.57e-13!35;CL:0000213!7.02e-13!57;CL:0000215!7.02e-13!57;CL:0000187!9.29e-13!54;CL:0000359!1.98e-12!32;CL:0000003!2.79e-12!722;CL:0000071!2.93e-12!18;CL:0002546!2.93e-12!18;CL:0002078!4.11e-12!44;CL:0000393!5.28e-11!60;CL:0000211!5.28e-11!60;CL:0000057!1.51e-09!75;CL:0000723!9.45e-08!436;CL:1000413!2.58e-07!9;CL:0000048!3.20e-07!430;CL:0000034!6.26e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.22e-17;24!CL:0000071;1.77e-13;18!CL:0000115;6.96e-13;36!CL:0000359;3.02e-12;32!CL:0000192;1.60e-09;43!CL:0002078;3.38e-09;45!CL:0000213;8.67e-09;58!CL:0000215;8.67e-09;58!CL:1000413;6.18e-08;9!CL:0000187;3.38e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.51e-27,121;CL:0002139,9.59e-17,24;CL:0000115,1.61e-15,36;CL:0002321,2.48e-15,250;CL:0002078,6.20e-14,45;CL:0000213,7.06e-14,58;CL:0000215,7.06e-14,58;CL:0000680,7.71e-14,58;CL:0000056,7.71e-14,58;CL:0000355,7.71e-14,58;CL:0000192,1.69e-13,43;CL:0000514,1.69e-13,43;CL:0000071,2.73e-13,18;CL:0002546,2.73e-13,18;CL:0000359,4.79e-13,32;CL:0000187,1.34e-12,55;CL:0000393,4.02e-11,61;CL:0000211,4.02e-11,61;CL:0000057,4.03e-10,76;CL:1000413,7.14e-08,9;CL:0000723,1.01e-07,433;CL:0000048,3.66e-07,427;CL:0000034,5.37e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002546;1.77e-13;18!CL:0000514;1.60e-09;43!CL:0000222;3.34e-08;121!CL:0000355;3.74e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.23e-24!79;UBERON:0007798!1.23e-24!79;UBERON:0000055!8.63e-22!69;UBERON:0001981!3.69e-18!60;UBERON:0007500!3.69e-18!60;UBERON:0004537!3.69e-18!60;UBERON:0006965!3.69e-18!60;UBERON:0004535!3.74e-17!110;UBERON:0001009!1.79e-16!113;UBERON:0000486!4.09e-16!82;UBERON:0000914!1.16e-15!83;UBERON:0002329!1.16e-15!83;UBERON:0003077!1.16e-15!83;UBERON:0003059!1.16e-15!83;UBERON:0007282!1.16e-15!83;UBERON:0009618!1.16e-15!83;UBERON:0007285!1.16e-15!83;UBERON:0001637!2.99e-15!42;UBERON:0003509!2.99e-15!42;UBERON:0004572!2.99e-15!42;UBERON:0004872!1.15e-14!84;UBERON:0004290!2.91e-14!70;UBERON:0000119!2.30e-13!312;UBERON:0000483!2.01e-12!309;UBERON:0001986!2.93e-12!18;UBERON:0004638!2.93e-12!18;UBERON:0004852!2.93e-12!18;UBERON:0004573!1.62e-11!33;UBERON:0004571!1.62e-11!33;UBERON:0005256!3.12e-11!143;UBERON:0000487!4.64e-11!22;UBERON:0006914!7.69e-11!25;UBERON:0001134!9.44e-11!61;UBERON:0002036!9.44e-11!61;UBERON:0003082!9.44e-11!61;UBERON:0003914!1.04e-10!118;UBERON:0002385!7.81e-10!63;UBERON:0001015!7.81e-10!63;UBERON:0000383!7.81e-10!63;UBERON:0000490!7.91e-10!138;UBERON:0000477!2.17e-09!286;UBERON:0002100!7.38e-08!216;UBERON:0004111!1.35e-07!241;UBERON:0003915!2.58e-07!9;UBERON:0004700!2.58e-07!9;UBERON:0001917!2.58e-07!9;UBERON:0000475!5.67e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.77e-13;18!UBERON:0001986;1.77e-13;18!UBERON:0004852;1.77e-13;18!UBERON:0000055;1.39e-12;65!UBERON:0007500;2.04e-12;56!UBERON:0001981;2.04e-12;56!UBERON:0004537;2.04e-12;56!UBERON:0001637;3.68e-12;42!UBERON:0003509;3.68e-12;42!UBERON:0004572;3.68e-12;42!UBERON:0002049;4.01e-12;75!UBERON:0007798;4.01e-12;75!UBERON:0000487;5.49e-12;22!UBERON:0006914;1.54e-11;25!UBERON:0004573;5.68e-11;33!UBERON:0004571;5.68e-11;33!UBERON:0003914;1.60e-10;74!UBERON:0000490;3.22e-08;33!UBERON:0003915;6.18e-08;9!UBERON:0004700;6.18e-08;9!UBERON:0001917;6.18e-08;9!UBERON:0000119;5.68e-07;139 | |||
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| ||
|short_description=p3@TPGS2 | |||
}} | }} |
Latest revision as of 09:49, 19 September 2015
Short description: | p3@TPGS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TPGS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000383056_5end |
EntrezGene: | TPGS2 |
HGNC: | 24561 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.51e-27 | 121 |
endothelial cell of vascular tree | 9.59e-17 | 24 |
endothelial cell | 1.61e-15 | 36 |
embryonic cell | 2.48e-15 | 250 |
meso-epithelial cell | 6.20e-14 | 45 |
lining cell | 7.06e-14 | 58 |
barrier cell | 7.06e-14 | 58 |
muscle precursor cell | 7.71e-14 | 58 |
myoblast | 7.71e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.71e-14 | 58 |
smooth muscle cell | 1.69e-13 | 43 |
smooth muscle myoblast | 1.69e-13 | 43 |
blood vessel endothelial cell | 2.73e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.73e-13 | 18 |
vascular associated smooth muscle cell | 4.79e-13 | 32 |
muscle cell | 1.34e-12 | 55 |
electrically responsive cell | 4.02e-11 | 61 |
electrically active cell | 4.02e-11 | 61 |
fibroblast | 4.03e-10 | 76 |
endothelial cell of artery | 7.14e-08 | 9 |
somatic stem cell | 1.01e-07 | 433 |
multi fate stem cell | 3.66e-07 | 427 |
stem cell | 5.37e-07 | 441 |