FFCP PHASE1:Hg19::chr19:50432453..50432468,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22809 | |EntrezGene=22809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=790 | |HGNC=790 | ||
|TSSclassifier=strong | |||
|UniProt=A8K3H7 | |UniProt=A8K3H7 | ||
|association_with_transcript=0bp_to_uc002prd.2_5end | |association_with_transcript=0bp_to_uc002prd.2_5end | ||
|cluster_id=chr19:50432453..50432468,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_ATF5_5end | |description=CAGE_peak_1_at_ATF5_5end | ||
|id=chr19:50432453..50432468,+ | |id=chr19:50432453..50432468,+ | ||
|ontology_enrichment_celltype=CL:0000548!2.79e-11!679;CL:0000004!2.79e-11!679;CL:0000255!2.79e-11!679;CL:0000012!1.04e-10!682;CL:0000144!1.79e-09!625;CL:0000222!6.21e-08!119;CL:0000136!4.53e-07!15;CL:0002371!7.93e-07!591 | |ontology_enrichment_celltype=CL:0000548!2.79e-11!679;CL:0000004!2.79e-11!679;CL:0000255!2.79e-11!679;CL:0000012!1.04e-10!682;CL:0000144!1.79e-09!625;CL:0000222!6.21e-08!119;CL:0000136!4.53e-07!15;CL:0002371!7.93e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.08e-07;33!CL:0002057;7.08e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.16e-08,121;CL:0000136,4.53e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050686!2.43e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,2.43e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000926!9.22e-09!448;UBERON:0004120!9.22e-09!448;UBERON:0006603!9.22e-09!448;UBERON:0000055!1.28e-08!69;UBERON:0003914!2.66e-08!118;UBERON:0009569!2.68e-07!113;UBERON:0004872!5.58e-07!84;UBERON:0002100!7.11e-07!216;UBERON:0001637!7.49e-07!42;UBERON:0003509!7.49e-07!42;UBERON:0004572!7.49e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.26e-09,199;UBERON:0000055,8.45e-09,68;UBERON:0000926,1.50e-08,315;UBERON:0004120,1.50e-08,315;UBERON:0006603,1.50e-08,315;UBERON:0003914,5.14e-08,117;UBERON:0009569,2.80e-07,112;UBERON:0004872,4.17e-07,83;UBERON:0001637,7.49e-07,42;UBERON:0003509,7.49e-07,42;UBERON:0004572,7.49e-07,42 | |||
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|short_description=p1@ATF5 | |short_description=p1@ATF5 | ||
}} | }} |
Latest revision as of 09:52, 19 September 2015
Short description: | p1@ATF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATF5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_uc002prd.2_5end |
EntrezGene: | ATF5 |
HGNC: | 790 |
UniProt: | A8K3H7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.16e-08 | 121 |
fat cell | 4.53e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk | 3.26e-09 | 199 |
vessel | 8.45e-09 | 68 |
mesoderm | 1.50e-08 | 315 |
mesoderm-derived structure | 1.50e-08 | 315 |
presumptive mesoderm | 1.50e-08 | 315 |
epithelial tube | 5.14e-08 | 117 |
subdivision of trunk | 2.80e-07 | 112 |
splanchnic layer of lateral plate mesoderm | 4.17e-07 | 83 |
artery | 7.49e-07 | 42 |
arterial blood vessel | 7.49e-07 | 42 |
arterial system | 7.49e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 2.43e-07 | 137 |