FFCP PHASE1:Hg19::chr12:56547669..56547684,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140465 | |EntrezGene=140465 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29823 | |HGNC=29823 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000549178_5end | |association_with_transcript=0bp_to_ENST00000549178_5end | ||
|cluster_id=chr12:56547669..56547684,+ | |||
|coexpression_cluster_id=C3302 | |||
|description=CAGE_peak_2_at_MYL6B_5end | |description=CAGE_peak_2_at_MYL6B_5end | ||
|id=chr12:56547669..56547684,+ | |id=chr12:56547669..56547684,+ | ||
|ontology_enrichment_celltype=CL:0000188!4.47e-10!9 | |ontology_enrichment_celltype=CL:0000188!4.47e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;6.89e-20;9!CL:0000680;6.76e-13;7!CL:0000515;2.71e-11;3!CL:0000056;1.39e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,6.51e-20,9;CL:0000515,1.33e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.39e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.48e-10!115;UBERON:0001134!1.53e-08!61;UBERON:0002036!1.53e-08!61;UBERON:0003082!1.53e-08!61;UBERON:0002385!4.87e-08!63;UBERON:0001015!4.87e-08!63;UBERON:0000383!4.87e-08!63;UBERON:0003076!9.16e-08!15;UBERON:0003057!9.16e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;8.33e-44;16!UBERON:0002036;8.33e-44;16!UBERON:0002385;1.54e-20;31!UBERON:0001015;1.54e-20;31!UBERON:0000383;1.54e-20;31!UBERON:0005090;2.61e-09;2!UBERON:0001630;2.61e-09;2!UBERON:0000341;4.36e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.95e-10,62;UBERON:0002036,2.95e-10,62;UBERON:0003082,2.95e-10,62;UBERON:0002385,7.87e-10,64;UBERON:0001015,7.87e-10,64;UBERON:0000383,7.87e-10,64;UBERON:0005090,2.61e-09,2;UBERON:0001630,2.61e-09,2;UBERON:0000341,4.36e-09,2;UBERON:0002329,1.57e-08,71;UBERON:0003059,1.57e-08,71;UBERON:0007282,1.57e-08,71;UBERON:0004290,1.57e-08,71;UBERON:0009618,1.57e-08,71;UBERON:0003077,2.29e-08,72;UBERON:0007285,2.29e-08,72;UBERON:0007524,3.31e-08,73;UBERON:0007503,1.80e-07,78;UBERON:0000486,7.89e-07,83 | |||
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| ||
|short_description=p2@MYL6B | |short_description=p2@MYL6B | ||
}} | }} |
Latest revision as of 10:01, 19 September 2015
Short description: | p2@MYL6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYL6B_5end |
Coexpression cluster: | C3302_Skeletal_diaphragm_skeletal_penis_throat_tongue_epididymis |
Association with transcript: | 0bp_to_ENST00000549178_5end |
EntrezGene: | MYL6B |
HGNC: | 29823 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 6.51e-20 | 9 |
skeletal muscle myoblast | 1.33e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.95e-10 | 62 |
striated muscle tissue | 2.95e-10 | 62 |
myotome | 2.95e-10 | 62 |
muscle tissue | 7.87e-10 | 64 |
musculature | 7.87e-10 | 64 |
musculature of body | 7.87e-10 | 64 |
muscle structure | 2.61e-09 | 2 |
muscle organ | 2.61e-09 | 2 |
throat | 4.36e-09 | 2 |
somite | 1.57e-08 | 71 |
presomitic mesoderm | 1.57e-08 | 71 |
presumptive segmental plate | 1.57e-08 | 71 |
dermomyotome | 1.57e-08 | 71 |
trunk paraxial mesoderm | 1.57e-08 | 71 |
paraxial mesoderm | 2.29e-08 | 72 |
presumptive paraxial mesoderm | 2.29e-08 | 72 |
dense mesenchyme tissue | 3.31e-08 | 73 |
epithelial vesicle | 1.80e-07 | 78 |
multilaminar epithelium | 7.89e-07 | 83 |