FFCP PHASE1:Hg19::chr7:73483600..73483621,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2006 | |EntrezGene=2006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3327 | |HGNC=3327 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-172bp_to_AF086171_5end | |||
|cluster_id=chr7:73483600..73483621,+ | |||
|coexpression_cluster_id=C379 | |||
|description=CAGE_peak_13_at_ELN_5end | |||
|id=chr7:73483600..73483621,+ | |||
|ontology_enrichment_celltype=CL:0000057!9.89e-13!75;CL:0002620!4.43e-10!23;CL:0000153!4.71e-09!9;CL:0000447!4.71e-09!9;CL:0002334!8.73e-09!12;CL:0000136!1.44e-08!15;CL:0000055!4.53e-08!180;CL:0000499!1.19e-07!27;CL:0000667!2.41e-07!6;CL:0000058!2.41e-07!6;CL:0000138!2.41e-07!6;CL:0002615!7.61e-07!3;CL:0000327!8.31e-07!14;CL:0002580!9.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.90e-18;12!CL:0002615;4.98e-15;3!CL:0002580;7.72e-15;3!CL:0002579;4.39e-14;3!CL:0000136;1.56e-12;13!CL:0000153;6.60e-12;9!CL:0000447;6.60e-12;9!CL:0002617;1.27e-10;2!CL:0000138;4.00e-07;6!CL:0000135;4.80e-07;3!CL:0000388;4.80e-07;3!CL:0000327;4.93e-07;15!CL:0000499;8.38e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.79e-18,15;CL:0002334,4.76e-18,12;CL:0002615,4.66e-15,3;CL:0002580,7.38e-15,3;CL:0002579,3.15e-14,3;CL:0000153,5.88e-12,9;CL:0000447,5.88e-12,9;CL:0002617,1.33e-10,2;CL:0000057,1.94e-08,76;CL:0000058,4.45e-07,6;CL:0000138,4.45e-07,6;CL:0000327,4.61e-07,15;CL:0000135,4.88e-07,3;CL:0000388,4.88e-07,3;CL:0000499,8.02e-07,28;CL:0000214,9.33e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!1.01e-11!6;UBERON:0002358!1.01e-11!6;UBERON:0003684!1.01e-11!6;UBERON:0001178!1.01e-11!6;UBERON:0004457!2.03e-11!12;UBERON:0000042!2.03e-11!12;UBERON:0002199!6.22e-08!45;UBERON:0002416!6.22e-08!45;UBERON:0002097!2.82e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.36e-31;9!UBERON:0000042;4.36e-31;9!UBERON:0003688;2.47e-27;6!UBERON:0002358;2.47e-27;6!UBERON:0003684;2.47e-27;6!UBERON:0001178;2.47e-27;6!UBERON:0001443;6.01e-15;11!UBERON:0000310;1.06e-11;10!UBERON:0007846;4.80e-07;3!UBERON:0000043;4.80e-07;3!UBERON:0007845;4.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.65e-27,6;UBERON:0002358,1.65e-27,6;UBERON:0003684,1.65e-27,6;UBERON:0001178,1.65e-27,6;UBERON:0004457,3.12e-23,12;UBERON:0000042,3.12e-23,12;UBERON:0001443,6.17e-15,11;UBERON:0000310,1.07e-11,10;UBERON:0007846,4.88e-07,3;UBERON:0000043,4.88e-07,3;UBERON:0007845,4.88e-07,3;UBERON:0006915,9.33e-07,3;UBERON:0007616,9.33e-07,3;UBERON:0002217,9.33e-07,3;UBERON:0002018,9.33e-07,3 | |||
|phase1_expression=5.08699461957559,10.4909256706582,7.89344662937438,6.00439790118782,5.81049422755474,0,2.53299878168311,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,0.50133791063589,2.02785126545153,0.795285947051099,1.45990461090791,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22540236350701,0,0,0,0,0,0,1.5324389789951,2.25357088359895,0,1.25572744982203,0.640672166455702,0,0.300091096084402,0,0.772921620136887,0.930584281657949,0.337552664482532,0.779496041289589,0.757301322732344,0.184099797284599,0.161646056818812,1.42003837006646,0.503760491138201,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,2.29723871668228,0,0.579125226670317,0.205476322550383,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.892144943985809,0.788512075169673,0,0,2.27407504055985,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,3.72161711728165,4.14347327877769,14.5943249105198,1.92208723883551,4.60536524160033,3.37793234401576,4.45254199334973,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02580050046556,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0.974853958525138,0,0,0,0,0,1.32687795048244,0,0,0,0,0.30982349809975,0,0,0,0,0,2.32218398827431,1.97576935775941,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,2.78947183551498,0.276283915531148,0,0,0,2.17727711363265,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,3.21031058919516,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,2.03382666702479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0.223171457441873,1.20930250476107,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20022211730523,1.37358282073117,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,2.1160556621441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91426595835484,0,0.198950775161368,0,0,0,0,0.154348316215889,0,0,1.22574160876953,0,0,0,2.113278637917,0.849635573439084,0,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0.5290268405154,2.23197010900051,0.924351257262837,5.62414530760926,0,0,0,0,0,0,0.250707539292375,0.0757786982182394,0.267964130156178,0,0,0.426467963801962,0.714193294391221,0,0,0,0.25458863311266,1.81905470062397,0,0.684466602170562,0,0,2.32862249582209,0,0,0,0,7.03922827210363,0,0.813792356631477,0,0.201273793591026,0 | |phase1_expression=5.08699461957559,10.4909256706582,7.89344662937438,6.00439790118782,5.81049422755474,0,2.53299878168311,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,0.50133791063589,2.02785126545153,0.795285947051099,1.45990461090791,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22540236350701,0,0,0,0,0,0,1.5324389789951,2.25357088359895,0,1.25572744982203,0.640672166455702,0,0.300091096084402,0,0.772921620136887,0.930584281657949,0.337552664482532,0.779496041289589,0.757301322732344,0.184099797284599,0.161646056818812,1.42003837006646,0.503760491138201,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,2.29723871668228,0,0.579125226670317,0.205476322550383,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.892144943985809,0.788512075169673,0,0,2.27407504055985,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,3.72161711728165,4.14347327877769,14.5943249105198,1.92208723883551,4.60536524160033,3.37793234401576,4.45254199334973,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02580050046556,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0.974853958525138,0,0,0,0,0,1.32687795048244,0,0,0,0,0.30982349809975,0,0,0,0,0,2.32218398827431,1.97576935775941,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,2.78947183551498,0.276283915531148,0,0,0,2.17727711363265,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,3.21031058919516,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,2.03382666702479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0.223171457441873,1.20930250476107,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20022211730523,1.37358282073117,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,2.1160556621441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91426595835484,0,0.198950775161368,0,0,0,0,0.154348316215889,0,0,1.22574160876953,0,0,0,2.113278637917,0.849635573439084,0,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0.5290268405154,2.23197010900051,0.924351257262837,5.62414530760926,0,0,0,0,0,0,0.250707539292375,0.0757786982182394,0.267964130156178,0,0,0.426467963801962,0.714193294391221,0,0,0,0.25458863311266,1.81905470062397,0,0.684466602170562,0,0,2.32862249582209,0,0,0,0,7.03922827210363,0,0.813792356631477,0,0.201273793591026,0 | ||
|short_description=p13@ELN | |||
}} | }} |
Latest revision as of 11:05, 19 September 2015
Short description: | p13@ELN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ELN_5end |
Coexpression cluster: | C379_Preadipocyte_Adipocyte_tenocyte_Chondrocyte_basal_aorta_trachea |
Association with transcript: | -172bp_to_AF086171_5end |
EntrezGene: | ELN |
HGNC: | 3327 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.79e-18 | 15 |
preadipocyte | 4.76e-18 | 12 |
adipocyte of omentum tissue | 4.66e-15 | 3 |
preadipocyte of the breast | 7.38e-15 | 3 |
omentum preadipocyte | 3.15e-14 | 3 |
GAG secreting cell | 5.88e-12 | 9 |
carbohydrate secreting cell | 5.88e-12 | 9 |
adipocyte of breast | 1.33e-10 | 2 |
fibroblast | 1.94e-08 | 76 |
chondroblast | 4.45e-07 | 6 |
chondrocyte | 4.45e-07 | 6 |
extracellular matrix secreting cell | 4.61e-07 | 15 |
fibrocyte | 4.88e-07 | 3 |
tendon cell | 4.88e-07 | 3 |
stromal cell | 8.02e-07 | 28 |
synovial cell | 9.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.65e-27 | 6 |
peritoneum | 1.65e-27 | 6 |
abdominal cavity | 1.65e-27 | 6 |
visceral peritoneum | 1.65e-27 | 6 |
cavity lining | 3.12e-23 | 12 |
serous membrane | 3.12e-23 | 12 |
chest | 6.17e-15 | 11 |
breast | 1.07e-11 | 10 |
dense regular connective tissue | 4.88e-07 | 3 |
tendon | 4.88e-07 | 3 |
regular connective tissue | 4.88e-07 | 3 |
stratified squamous epithelium | 9.33e-07 | 3 |
layer of synovial tissue | 9.33e-07 | 3 |
synovial joint | 9.33e-07 | 3 |
synovial membrane of synovial joint | 9.33e-07 | 3 |