FFCP PHASE1:Hg19::chr8:93029879..93029904,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1535 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q06455,Q7Z4J5 | ||
|association_with_transcript=3bp_to_NM_175636,uc003yfb.1,uc003yff.1,uc003yfg.1_5end | |association_with_transcript=3bp_to_NM_175636,uc003yfb.1,uc003yff.1,uc003yfg.1_5end | ||
|cluster_id=chr8:93029879..93029904,- | |cluster_id=chr8:93029879..93029904,- | ||
Latest revision as of 11:41, 19 September 2015
| Short description: | p30@RUNX1T1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_30_at_RUNX1T1_5end |
| Coexpression cluster: | C210_Burkitt_lymphoma_appendix_acute_diffuse_CD19_tonsil |
| Association with transcript: | 3bp_to_NM_175636, uc003yfb.1, uc003yff.1, uc003yfg.1_5end |
| EntrezGene: | RUNX1T1 |
| HGNC: | 1535 |
| UniProt: | Q06455Q7Z4J5 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p30@RUNX1T1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| B-1 B cell | 9.79e-26 | 1 |
| mature B cell | 1.37e-13 | 2 |
| pre-B-II cell | 1.37e-13 | 2 |
| transitional stage B cell | 1.37e-13 | 2 |
| small pre-B-II cell | 1.37e-13 | 2 |
| immature B cell | 1.37e-13 | 2 |
| precursor B cell | 1.67e-09 | 3 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| corpus striatum | 8.31e-99 | 4 |
| striatum | 8.31e-99 | 4 |
| ventral part of telencephalon | 8.31e-99 | 4 |
| future corpus striatum | 8.31e-99 | 4 |
| telencephalic nucleus | 6.12e-88 | 7 |
| caudate-putamen | 1.29e-74 | 3 |
| dorsal striatum | 1.29e-74 | 3 |
| basal ganglion | 1.51e-68 | 9 |
| neural nucleus | 1.51e-68 | 9 |
| nuclear complex of neuraxis | 1.51e-68 | 9 |
Showing 1 to 10 of 47 entries
| Ontology term | p-value | n |
|---|---|---|
| lymphatic system cancer | 9.79e-26 | 1 |
| lymphosarcoma | 9.79e-26 | 1 |
| lymphoma | 6.28e-11 | 10 |
Showing 1 to 3 of 3 entries
