FFCP PHASE1:Hg19::chr11:65638757..65638772,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30008 | |EntrezGene=30008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3219 | |HGNC=3219 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-84bp_to_ENST00000527969_5end | |association_with_transcript=-84bp_to_ENST00000527969_5end | ||
|cluster_id=chr11:65638757..65638772,- | |||
|coexpression_cluster_id=C1000 | |coexpression_cluster_id=C1000 | ||
|description=CAGE_peak_4_at_EFEMP2_5end | |description=CAGE_peak_4_at_EFEMP2_5end | ||
|id=chr11:65638757..65638772,- | |id=chr11:65638757..65638772,- | ||
|ontology_enrichment_celltype=CL:0000055!1.46e-31!180;CL:0000057!8.32e-19!75;CL:0000183!1.96e-14!59;CL:0000222!5.05e-14!119;CL:0000680!1.07e-13!57;CL:0000056!1.07e-13!57;CL:0000355!1.07e-13!57;CL:0000187!1.24e-12!54;CL:0000393!4.38e-12!60;CL:0000211!4.38e-12!60;CL:0000192!1.01e-11!42;CL:0000514!1.01e-11!42;CL:0000359!5.08e-10!32;CL:0002334!4.00e-07!12;CL:0000220!4.29e-07!246;CL:0002321!4.66e-07!248;CL:0002620!7.73e-07!23;CL:0000144!9.81e-07!625 | |ontology_enrichment_celltype=CL:0000055!1.46e-31!180;CL:0000057!8.32e-19!75;CL:0000183!1.96e-14!59;CL:0000222!5.05e-14!119;CL:0000680!1.07e-13!57;CL:0000056!1.07e-13!57;CL:0000355!1.07e-13!57;CL:0000187!1.24e-12!54;CL:0000393!4.38e-12!60;CL:0000211!4.38e-12!60;CL:0000192!1.01e-11!42;CL:0000514!1.01e-11!42;CL:0000359!5.08e-10!32;CL:0002334!4.00e-07!12;CL:0000220!4.29e-07!246;CL:0002321!4.66e-07!248;CL:0002620!7.73e-07!23;CL:0000144!9.81e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000134;3.37e-10;55!CL:0000048;2.06e-09;58!CL:0002334;4.56e-09;12!CL:0000723;6.92e-09;61!CL:0000192;6.97e-09;43!CL:0000359;9.83e-09;32!CL:0002320;1.24e-08;188!CL:0000057;2.64e-08;73!CL:0002620;5.07e-07;23!CL:0000187;9.17e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.44e-21,76;CL:0000222,7.16e-14,121;CL:0000048,3.33e-13,427;CL:0000723,2.22e-12,433;CL:0000680,3.16e-12,58;CL:0000056,3.16e-12,58;CL:0000355,3.16e-12,58;CL:0000187,1.65e-11,55;CL:0000034,2.46e-11,441;CL:0000192,2.76e-11,43;CL:0000514,2.76e-11,43;CL:0000393,7.99e-10,61;CL:0000211,7.99e-10,61;CL:0002334,3.55e-09,12;CL:0000359,1.01e-08,32;CL:0002620,5.78e-07,23;CL:0002320,7.39e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;6.97e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;6.42e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.56e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.11e-16!83;UBERON:0002329!1.11e-16!83;UBERON:0003077!1.11e-16!83;UBERON:0003059!1.11e-16!83;UBERON:0007282!1.11e-16!83;UBERON:0009618!1.11e-16!83;UBERON:0007285!1.11e-16!83;UBERON:0004290!1.39e-14!70;UBERON:0004872!1.44e-13!84;UBERON:0005256!4.85e-13!143;UBERON:0001134!6.22e-13!61;UBERON:0002036!6.22e-13!61;UBERON:0003082!6.22e-13!61;UBERON:0000486!7.57e-13!82;UBERON:0002385!9.22e-13!63;UBERON:0001015!9.22e-13!63;UBERON:0000383!9.22e-13!63;UBERON:0002049!6.60e-12!79;UBERON:0007798!6.60e-12!79;UBERON:0001637!1.58e-11!42;UBERON:0003509!1.58e-11!42;UBERON:0004572!1.58e-11!42;UBERON:0001981!5.78e-10!60;UBERON:0007500!5.78e-10!60;UBERON:0004537!5.78e-10!60;UBERON:0006965!5.78e-10!60;UBERON:0000475!8.31e-10!365;UBERON:0002100!1.07e-09!216;UBERON:0004573!1.40e-09!33;UBERON:0004571!1.40e-09!33;UBERON:0000055!1.76e-09!69;UBERON:0004535!2.90e-09!110;UBERON:0003914!2.93e-09!118;UBERON:0001009!3.05e-09!113;UBERON:0000468!2.16e-08!659;UBERON:0000490!3.37e-07!138;UBERON:0000481!7.04e-07!347 | |ontology_enrichment_uberon=UBERON:0000914!1.11e-16!83;UBERON:0002329!1.11e-16!83;UBERON:0003077!1.11e-16!83;UBERON:0003059!1.11e-16!83;UBERON:0007282!1.11e-16!83;UBERON:0009618!1.11e-16!83;UBERON:0007285!1.11e-16!83;UBERON:0004290!1.39e-14!70;UBERON:0004872!1.44e-13!84;UBERON:0005256!4.85e-13!143;UBERON:0001134!6.22e-13!61;UBERON:0002036!6.22e-13!61;UBERON:0003082!6.22e-13!61;UBERON:0000486!7.57e-13!82;UBERON:0002385!9.22e-13!63;UBERON:0001015!9.22e-13!63;UBERON:0000383!9.22e-13!63;UBERON:0002049!6.60e-12!79;UBERON:0007798!6.60e-12!79;UBERON:0001637!1.58e-11!42;UBERON:0003509!1.58e-11!42;UBERON:0004572!1.58e-11!42;UBERON:0001981!5.78e-10!60;UBERON:0007500!5.78e-10!60;UBERON:0004537!5.78e-10!60;UBERON:0006965!5.78e-10!60;UBERON:0000475!8.31e-10!365;UBERON:0002100!1.07e-09!216;UBERON:0004573!1.40e-09!33;UBERON:0004571!1.40e-09!33;UBERON:0000055!1.76e-09!69;UBERON:0004535!2.90e-09!110;UBERON:0003914!2.93e-09!118;UBERON:0001009!3.05e-09!113;UBERON:0000468!2.16e-08!659;UBERON:0000490!3.37e-07!138;UBERON:0000481!7.04e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.38e-10;33!UBERON:0004571;5.38e-10;33!UBERON:0001637;3.49e-09;42!UBERON:0003509;3.49e-09;42!UBERON:0004572;3.49e-09;42!UBERON:0002384;6.66e-08;198!UBERON:0000947;7.47e-07;21!UBERON:0010191;7.47e-07;21!UBERON:0004457;9.43e-07;9!UBERON:0000042;9.43e-07;9 | |||
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| ||
|short_description=p4@EFEMP2 | |short_description=p4@EFEMP2 | ||
}} | }} |
Latest revision as of 11:45, 19 September 2015
Short description: | p4@EFEMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EFEMP2_5end |
Coexpression cluster: | C1000_Osteoblast_Preadipocyte_Hair_Adipocyte_tenocyte_Mesenchymal_leiomyoma |
Association with transcript: | -84bp_to_ENST00000527969_5end |
EntrezGene: | EFEMP2 |
HGNC: | 3219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.44e-21 | 76 |
mesodermal cell | 7.16e-14 | 121 |
multi fate stem cell | 3.33e-13 | 427 |
somatic stem cell | 2.22e-12 | 433 |
muscle precursor cell | 3.16e-12 | 58 |
myoblast | 3.16e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.16e-12 | 58 |
muscle cell | 1.65e-11 | 55 |
stem cell | 2.46e-11 | 441 |
smooth muscle cell | 2.76e-11 | 43 |
smooth muscle myoblast | 2.76e-11 | 43 |
electrically responsive cell | 7.99e-10 | 61 |
electrically active cell | 7.99e-10 | 61 |
preadipocyte | 3.55e-09 | 12 |
vascular associated smooth muscle cell | 1.01e-08 | 32 |
skin fibroblast | 5.78e-07 | 23 |
connective tissue cell | 7.39e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.56e-08 | 14 |