FFCP PHASE1:Hg19::chr10:8097357..8097368,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:8097357..8097368,+
|short_description=p15@GATA3
|description=CAGE_peak_15_at_GATA3_5end
|association_with_transcript=-49bp_to_X55122_5end
|EntrezGene=262...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2625 | |EntrezGene=2625 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4172 | |HGNC=4172 | ||
|TSSclassifier=strong | |||
|UniProt=P23771 | |UniProt=P23771 | ||
|association_with_transcript=-49bp_to_X55122_5end | |||
|cluster_id=chr10:8097357..8097368,+ | |||
|coexpression_cluster_id=C1124 | |||
|description=CAGE_peak_15_at_GATA3_5end | |||
|id=chr10:8097357..8097368,+ | |||
|ontology_enrichment_celltype=CL:0002541!5.33e-08!3;CL:0000039!1.49e-07!7;CL:0000586!1.49e-07!7;CL:0000623!9.89e-07!3;CL:0000825!9.89e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;8.69e-36;3!CL:0000039;1.55e-15;7!CL:0000586;1.55e-15;7!CL:0000349;1.95e-15;19!CL:0002537;2.19e-10;5!CL:0000317;4.04e-07;2!CL:1000448;4.04e-07;2!CL:0002308;4.04e-07;2!CL:0002140;4.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.87e-36,3;CL:0000039,1.24e-15,7;CL:0000586,1.24e-15,7;CL:0000349,1.93e-15,19;CL:0002537,2.35e-10,5;CL:0000317,4.17e-07,2;CL:1000448,4.17e-07,2;CL:0002308,4.17e-07,2;CL:0002140,4.17e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!7.46e-10!4;DOID:1612!7.46e-10!4;DOID:3095!1.02e-07!22;DOID:2994!1.02e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.08e-27;4!DOID:1612;1.08e-27;4!DOID:3095;1.06e-08;22!DOID:2994;1.06e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.08e-27,4;DOID:1612,1.08e-27,4;DOID:3095,8.84e-09,22;DOID:2994,8.84e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.42e-09!14;UBERON:0000158!5.42e-09!14;UBERON:0000476!5.33e-08!3;UBERON:0000920!5.33e-08!3;UBERON:0000310!1.36e-07!10;UBERON:0006947!1.81e-07!3;UBERON:0004054!1.81e-07!3;UBERON:0001443!8.08e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;8.69e-36;3!UBERON:0000920;8.69e-36;3!UBERON:0005631;2.70e-29;10!UBERON:0000158;2.70e-29;10!UBERON:0000478;3.27e-12;24!UBERON:0000310;1.86e-11;10!UBERON:0001443;1.83e-10;11!UBERON:0000305;1.15e-07;7!UBERON:0002419;4.04e-07;2!UBERON:0007771;4.04e-07;2!UBERON:0003297;4.04e-07;2!UBERON:0001821;4.04e-07;2!UBERON:0003487;4.04e-07;2!UBERON:0001820;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.87e-36,3;UBERON:0005631,5.93e-21,14;UBERON:0000158,5.93e-21,14;UBERON:0003124,8.74e-16,7;UBERON:0000478,3.23e-12,24;UBERON:0000310,1.86e-11,10;UBERON:0001443,1.83e-10,11;UBERON:0000305,1.21e-07,7;UBERON:0002419,4.17e-07,2;UBERON:0007771,4.17e-07,2;UBERON:0003297,4.17e-07,2;UBERON:0001821,4.17e-07,2;UBERON:0003487,4.17e-07,2;UBERON:0001820,4.17e-07,2;UBERON:0005089,4.17e-07,2;UBERON:0005088,4.17e-07,2;UBERON:0004871,8.60e-07,8 | |||
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| ||
|short_description=p15@GATA3 | |||
}} | }} |
Latest revision as of 12:07, 19 September 2015
Short description: | p15@GATA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_GATA3_5end |
Coexpression cluster: | C1124_MCF7_breast_chorionic_nasal_choriocarcinoma_seminal_amniotic |
Association with transcript: | -49bp_to_X55122_5end |
EntrezGene: | GATA3 |
HGNC: | 4172 |
UniProt: | P23771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.87e-36 | 3 |
germ line cell | 1.24e-15 | 7 |
germ cell | 1.24e-15 | 7 |
extraembryonic cell | 1.93e-15 | 19 |
amnion mesenchymal stem cell | 2.35e-10 | 5 |
sebum secreting cell | 4.17e-07 | 2 |
epithelial cell of sweat gland | 4.17e-07 | 2 |
epithelial cell of skin gland | 4.17e-07 | 2 |
acinar cell of sebaceous gland | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.87e-36 | 3 |
extraembryonic membrane | 5.93e-21 | 14 |
membranous layer | 5.93e-21 | 14 |
chorion | 8.74e-16 | 7 |
extraembryonic structure | 3.23e-12 | 24 |
breast | 1.86e-11 | 10 |
chest | 1.83e-10 | 11 |
amnion | 1.21e-07 | 7 |
skin gland | 4.17e-07 | 2 |
epidermis gland | 4.17e-07 | 2 |
gland of integumental system | 4.17e-07 | 2 |
sebaceous gland | 4.17e-07 | 2 |
skin sebaceous gland | 4.17e-07 | 2 |
sweat gland | 4.17e-07 | 2 |
sweat gland placode | 4.17e-07 | 2 |
sebaceous gland placode | 4.17e-07 | 2 |
somatic layer of lateral plate mesoderm | 8.60e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.08e-27 | 4 |
breast cancer | 1.08e-27 | 4 |
germ cell and embryonal cancer | 8.84e-09 | 22 |
germ cell cancer | 8.84e-09 | 22 |