FFCP PHASE1:Hg19::chr19:51014588..51014633,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:51014588..51014633,-
|short_description=p4@JOSD2
|description=CAGE_peak_4_at_JOSD2_5end
|association_with_transcript=-111bp_to_uc002pso.1,uc002psp.1,uc002...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=126119 | |EntrezGene=126119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28853 | |HGNC=28853 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-111bp_to_uc002pso.1,uc002psp.1,uc002psq.1_5end | |||
|cluster_id=chr19:51014588..51014633,- | |||
|description=CAGE_peak_4_at_JOSD2_5end | |||
|id=chr19:51014588..51014633,- | |||
|ontology_enrichment_celltype=CL:0000548!6.22e-19!679;CL:0000004!6.22e-19!679;CL:0000255!6.22e-19!679;CL:0000012!2.15e-18!682;CL:0000144!1.81e-13!625;CL:0000003!1.65e-12!722;CL:0000222!4.39e-11!119;CL:0002371!1.52e-10!591;CL:0000220!1.92e-10!246;CL:0002321!6.82e-10!248;CL:0000066!8.15e-08!254;CL:0000063!1.46e-07!578;CL:0000213!1.58e-07!57;CL:0000215!1.58e-07!57;CL:0000055!2.41e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.07e-12,121;CL:0002321,1.98e-10,250;CL:0000213,4.14e-08,58;CL:0000215,4.14e-08,58;CL:0000066,1.78e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,2.84e-07,83 | |||
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| ||
|short_description=p4@JOSD2 | |||
}} | }} |
Latest revision as of 12:07, 19 September 2015
Short description: | p4@JOSD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_JOSD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -111bp_to_uc002pso.1, uc002psp.1, uc002psq.1_5end |
EntrezGene: | JOSD2 |
HGNC: | 28853 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.07e-12 | 121 |
embryonic cell | 1.98e-10 | 250 |
lining cell | 4.14e-08 | 58 |
barrier cell | 4.14e-08 | 58 |
epithelial cell | 1.78e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 2.84e-07 | 83 |