FFCP PHASE1:Hg19::chr17:30816583..30816592,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8851 | |EntrezGene=8851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1775 | |HGNC=1775 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-170bp_to_AK095754_5end | |association_with_transcript=-170bp_to_AK095754_5end | ||
|cluster_id=chr17:30816583..30816592,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_16_at_CDK5R1_5end | |description=CAGE_peak_16_at_CDK5R1_5end | ||
|id=chr17:30816583..30816592,+ | |id=chr17:30816583..30816592,+ | ||
|ontology_enrichment_celltype=CL:0000945!7.47e-10!24;CL:0000826!7.47e-10!24 | |ontology_enrichment_celltype=CL:0000945!7.47e-10!24;CL:0000826!7.47e-10!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.79e-42;24!CL:0000946;1.78e-29;1!CL:0000786;1.78e-29;1!CL:0000542;1.05e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.86e-42,24;CL:0000826,1.86e-42,24;CL:0000946,1.33e-29,1;CL:0000786,1.33e-29,1;CL:0000980,1.33e-29,1;CL:0000838,7.83e-20,52;CL:0000542,1.82e-19,53;CL:0000051,1.82e-19,53;CL:0000785,1.54e-15,2;CL:0000955,1.54e-15,2;CL:0000818,1.54e-15,2;CL:0000954,1.54e-15,2;CL:0000816,1.54e-15,2;CL:0000817,8.17e-11,3;CL:0002087,5.00e-09,115;CL:0002031,1.16e-08,120;CL:0000738,1.15e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000954;1.78e-15;2!CL:0000051;1.05e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;1.78e-29;1!DOID:630;3.64e-29;1!DOID:0050177;3.64e-29;1!DOID:0050427;3.64e-29;1!DOID:74;1.78e-15;2!DOID:1287;2.11e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,2.37e-29,1;DOID:630,4.20e-29,1;DOID:0050177,4.20e-29,1;DOID:0050427,4.20e-29,1;DOID:74,2.05e-15,2;DOID:1287,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002619!6.32e-45!22;UBERON:0001950!4.18e-43!20;UBERON:0001893!3.00e-41!34;UBERON:0000956!2.34e-39!25;UBERON:0000203!2.34e-39!25;UBERON:0001869!3.89e-39!32;UBERON:0002791!5.76e-38!33;UBERON:0002780!1.09e-33!41;UBERON:0001890!1.09e-33!41;UBERON:0006240!1.09e-33!41;UBERON:0003080!8.26e-33!42;UBERON:0002020!1.79e-32!34;UBERON:0003528!1.79e-32!34;UBERON:0001049!4.64e-26!57;UBERON:0005068!4.64e-26!57;UBERON:0006241!4.64e-26!57;UBERON:0007135!4.64e-26!57;UBERON:0002616!4.79e-25!59;UBERON:0001017!4.60e-23!82;UBERON:0000955!7.20e-23!69;UBERON:0006238!7.20e-23!69;UBERON:0001871!3.84e-22!7;UBERON:0005743!8.67e-22!86;UBERON:0003056!1.69e-21!61;UBERON:0000073!2.64e-19!94;UBERON:0001016!2.64e-19!94;UBERON:0003075!7.02e-18!86;UBERON:0007284!7.02e-18!86;UBERON:0002346!6.76e-17!90;UBERON:0000349!2.20e-16!5;UBERON:0007023!1.13e-13!115;UBERON:0000153!5.20e-13!129;UBERON:0007811!5.20e-13!129;UBERON:0000200!1.07e-12!6;UBERON:0000033!2.14e-12!123;UBERON:0001876!1.91e-11!2;UBERON:0004121!6.04e-11!169;UBERON:0000924!1.41e-10!173;UBERON:0006601!1.41e-10!173;UBERON:0001872!1.99e-09!5;UBERON:0002021!2.30e-09!5;UBERON:0002106!1.30e-07!3;UBERON:0004854!1.30e-07!3;UBERON:0009034!1.30e-07!3;UBERON:0002095!1.30e-07!3;UBERON:0004782!1.30e-07!3;UBERON:0003281!1.30e-07!3;UBERON:0009664!1.30e-07!3;UBERON:0002296!1.30e-07!3;UBERON:0005602!1.30e-07!3;UBERON:0001179!1.30e-07!3;UBERON:0006293!1.30e-07!3;UBERON:0002771!3.34e-07!3;UBERON:0004177!5.48e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p16@CDK5R1 | |short_description=p16@CDK5R1 | ||
}} | }} |
Latest revision as of 12:35, 19 September 2015
Short description: | p16@CDK5R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CDK5R1_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -170bp_to_AK095754_5end |
EntrezGene: | CDK5R1 |
HGNC: | 1775 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.86e-42 | 24 |
pro-B cell | 1.86e-42 | 24 |
antibody secreting cell | 1.33e-29 | 1 |
plasma cell | 1.33e-29 | 1 |
plasmablast | 1.33e-29 | 1 |
lymphoid lineage restricted progenitor cell | 7.83e-20 | 52 |
lymphocyte | 1.82e-19 | 53 |
common lymphoid progenitor | 1.82e-19 | 53 |
mature B cell | 1.54e-15 | 2 |
pre-B-II cell | 1.54e-15 | 2 |
transitional stage B cell | 1.54e-15 | 2 |
small pre-B-II cell | 1.54e-15 | 2 |
immature B cell | 1.54e-15 | 2 |
precursor B cell | 8.17e-11 | 3 |
nongranular leukocyte | 5.00e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.16e-08 | 120 |
leukocyte | 1.15e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.37e-29 | 1 |
genetic disease | 4.20e-29 | 1 |
monogenic disease | 4.20e-29 | 1 |
xeroderma pigmentosum | 4.20e-29 | 1 |
hematopoietic system disease | 2.05e-15 | 2 |
cardiovascular system disease | 2.26e-08 | 4 |