FFCP PHASE1:Hg19::chr15:85427860..85427878,+: Difference between revisions
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|id=chr15:85427860..85427878,+
|short_description=p4@SLC28A1
|description=CAGE_peak_4_at_SLC28A1_5end
|association_with_transcript=-6bp_to_ENST00000338602_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9154 | |EntrezGene=9154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11001 | |HGNC=11001 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000338602_5end | |||
|cluster_id=chr15:85427860..85427878,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_SLC28A1_5end | |||
|id=chr15:85427860..85427878,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.68e-28!12;CL:0000417!2.68e-28!12;CL:0000668!2.68e-28!12;CL:0000414!2.68e-28!12;CL:0000412!2.68e-28!12;CL:0000182!2.68e-28!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.65e-13;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.65e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.44e-07;10!UBERON:0007687;1.44e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.57e-24!19;UBERON:0006925!4.57e-24!19;UBERON:0008836!4.57e-24!19;UBERON:0008835!1.07e-20!22;UBERON:0003894!1.07e-20!22;UBERON:0009854!9.02e-20!23;UBERON:0005172!2.40e-19!55;UBERON:0005173!2.40e-19!55;UBERON:0007499!3.88e-18!25;UBERON:0009497!3.88e-18!25;UBERON:0000015!3.88e-18!25;UBERON:0002423!3.88e-18!25;UBERON:0006235!3.88e-18!25;UBERON:0004161!3.88e-18!25;UBERON:0005057!2.05e-17!26;UBERON:0009856!2.05e-17!26;UBERON:0002417!2.79e-17!61;UBERON:0000916!2.79e-17!61;UBERON:0002368!1.51e-16!35;UBERON:0002365!1.70e-14!31;UBERON:0002330!1.70e-14!31;UBERON:0000949!1.17e-12!45;UBERON:0001301!1.61e-10!1;UBERON:0002530!2.02e-09!59;UBERON:0005177!3.99e-09!107;UBERON:0009569!1.50e-08!113;UBERON:0003929!5.15e-08!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.61e-14;19!UBERON:0006925;1.61e-14;19!UBERON:0002423;4.11e-11;25!UBERON:0002365;2.62e-09;31!UBERON:0002330;2.62e-09;31!UBERON:0005172;2.95e-09;52!UBERON:0005173;2.95e-09;52!UBERON:0002368;1.39e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.61e-14,19;UBERON:0006925,1.61e-14,19;UBERON:0008836,1.61e-14,19;UBERON:0008835,1.38e-12,22;UBERON:0003894,1.38e-12,22;UBERON:0009854,4.73e-12,23;UBERON:0007499,4.11e-11,25;UBERON:0009497,4.11e-11,25;UBERON:0000015,4.11e-11,25;UBERON:0002423,4.11e-11,25;UBERON:0006235,4.11e-11,25;UBERON:0004161,4.11e-11,25;UBERON:0005172,5.40e-11,54;UBERON:0005173,5.40e-11,54;UBERON:0009856,1.07e-10,26;UBERON:0002417,7.14e-10,60;UBERON:0000916,7.14e-10,60;UBERON:0002365,5.14e-09,31;UBERON:0002330,5.14e-09,31;UBERON:0002368,5.16e-08,35 | |||
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|short_description=p4@SLC28A1 | |||
}} | }} |
Latest revision as of 13:14, 19 September 2015
Short description: | p4@SLC28A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC28A1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -6bp_to_ENST00000338602_5end |
EntrezGene: | SLC28A1 |
HGNC: | 11001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.65e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.61e-14 | 19 |
digestive gland | 1.61e-14 | 19 |
liver bud | 1.61e-14 | 19 |
hepatic diverticulum | 1.38e-12 | 22 |
liver primordium | 1.38e-12 | 22 |
digestive tract diverticulum | 4.73e-12 | 23 |
epithelial sac | 4.11e-11 | 25 |
epithelium of foregut-midgut junction | 4.11e-11 | 25 |
anatomical boundary | 4.11e-11 | 25 |
hepatobiliary system | 4.11e-11 | 25 |
foregut-midgut junction | 4.11e-11 | 25 |
septum transversum | 4.11e-11 | 25 |
abdomen element | 5.40e-11 | 54 |
abdominal segment element | 5.40e-11 | 54 |
sac | 1.07e-10 | 26 |
abdominal segment of trunk | 7.14e-10 | 60 |
abdomen | 7.14e-10 | 60 |
exocrine gland | 5.14e-09 | 31 |
exocrine system | 5.14e-09 | 31 |
endocrine gland | 5.16e-08 | 35 |