FFCP PHASE1:Hg19::chr15:85429926..85429950,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9154 | |EntrezGene=9154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11001 | |HGNC=11001 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_BC143908_5end | |association_with_transcript=3bp_to_BC143908_5end | ||
|cluster_id=chr15:85429926..85429950,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_2_at_SLC28A1_5end | |description=CAGE_peak_2_at_SLC28A1_5end | ||
|id=chr15:85429926..85429950,+ | |id=chr15:85429926..85429950,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.23e-12!12;CL:0000417!2.23e-12!12;CL:0000668!2.23e-12!12;CL:0000414!2.23e-12!12;CL:0000412!2.23e-12!12;CL:0000182!2.23e-12!12 | |ontology_enrichment_celltype=CL:0000181!2.23e-12!12;CL:0000417!2.23e-12!12;CL:0000668!2.23e-12!12;CL:0000414!2.23e-12!12;CL:0000412!2.23e-12!12;CL:0000182!2.23e-12!12 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.78e-15;10!UBERON:0007687;1.78e-15;10!UBERON:0003104;1.02e-13;31!UBERON:0004161;7.59e-07;11 | |||
|ontology_enrichment_disease=DOID:114!5.20e-13!2;DOID:7!1.02e-08!39;DOID:178!3.01e-07!1;DOID:326!3.01e-07!1;DOID:3978!3.01e-07!1;DOID:3394!3.01e-07!1;DOID:5844!3.01e-07!1;DOID:5662!3.40e-07!1;DOID:1287!6.26e-07!4 | |ontology_enrichment_disease=DOID:114!5.20e-13!2;DOID:7!1.02e-08!39;DOID:178!3.01e-07!1;DOID:326!3.01e-07!1;DOID:3978!3.01e-07!1;DOID:3394!3.01e-07!1;DOID:5844!3.01e-07!1;DOID:5662!3.40e-07!1;DOID:1287!6.26e-07!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.25e-15!19;UBERON:0006925!7.25e-15!19;UBERON:0008836!7.25e-15!19;UBERON:0009497!2.21e-14!25;UBERON:0000015!2.21e-14!25;UBERON:0002423!2.21e-14!25;UBERON:0006235!2.21e-14!25;UBERON:0004161!2.21e-14!25;UBERON:0005172!9.83e-14!55;UBERON:0005173!9.83e-14!55;UBERON:0008835!1.01e-12!22;UBERON:0003894!1.01e-12!22;UBERON:0002417!3.71e-12!61;UBERON:0000916!3.71e-12!61;UBERON:0009854!3.92e-12!23;UBERON:0007499!4.29e-11!25;UBERON:0005057!1.24e-10!26;UBERON:0009856!1.24e-10!26;UBERON:0002365!8.84e-09!31;UBERON:0002330!8.84e-09!31;UBERON:0002368!1.12e-07!35;UBERON:0002084!1.42e-07!1;UBERON:0002082!1.42e-07!1;UBERON:0004706!1.42e-07!1;UBERON:0007023!1.58e-07!115;UBERON:0007029!1.61e-07!1;UBERON:0007100!1.67e-07!27;UBERON:0002146!2.35e-07!1;UBERON:0005623!2.35e-07!1;UBERON:0003103!4.04e-07!69;UBERON:0002336!4.61e-07!1;UBERON:0001018!4.61e-07!1;UBERON:0002473!4.61e-07!1;UBERON:0005340!4.61e-07!1;UBERON:0002316!4.61e-07!1;UBERON:0003544!4.61e-07!1;UBERON:0001020!4.61e-07!1;UBERON:0005970!4.61e-07!1;UBERON:0002437!4.61e-07!1;UBERON:0001882!4.90e-07!1;UBERON:0005403!4.90e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;8.12e-31;4!UBERON:0000160;2.74e-15;17!UBERON:0005409;4.86e-12;22!UBERON:0002107;2.43e-08;19!UBERON:0006925;2.43e-08;19!UBERON:0005172;2.73e-08;52!UBERON:0005173;2.73e-08;52!UBERON:0004921;4.25e-07;33!UBERON:0002114;7.28e-07;2!UBERON:0002113;8.68e-07;24!UBERON:0011143;8.68e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,8.55e-31,4;UBERON:0000160,2.74e-15,17;UBERON:0005172,9.42e-11,54;UBERON:0005173,9.42e-11,54;UBERON:0005409,1.10e-10,25;UBERON:0002417,1.17e-09,60;UBERON:0000916,1.17e-09,60;UBERON:0002107,2.37e-08,19;UBERON:0006925,2.37e-08,19;UBERON:0008836,2.37e-08,19;UBERON:0008835,2.75e-07,22;UBERON:0003894,2.75e-07,22;UBERON:0009854,5.42e-07,23;UBERON:0002114,7.28e-07,2 | |||
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|short_description=p2@SLC28A1 | |short_description=p2@SLC28A1 | ||
}} | }} |
Latest revision as of 13:17, 19 September 2015
Short description: | p2@SLC28A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC28A1_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 3bp_to_BC143908_5end |
EntrezGene: | SLC28A1 |
HGNC: | 11001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 8.55e-31 | 4 |
intestine | 2.74e-15 | 17 |
abdomen element | 9.42e-11 | 54 |
abdominal segment element | 9.42e-11 | 54 |
gastrointestinal system | 1.10e-10 | 25 |
abdominal segment of trunk | 1.17e-09 | 60 |
abdomen | 1.17e-09 | 60 |
liver | 2.37e-08 | 19 |
digestive gland | 2.37e-08 | 19 |
liver bud | 2.37e-08 | 19 |
hepatic diverticulum | 2.75e-07 | 22 |
liver primordium | 2.75e-07 | 22 |
digestive tract diverticulum | 5.42e-07 | 23 |
duodenum | 7.28e-07 | 2 |