FFCP PHASE1:Hg19::chr11:66055712..66055745,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10897 | |EntrezGene=10897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16688 | |HGNC=16688 | ||
|TSSclassifier=strong | |||
|UniProt=O00606 | |UniProt=O00606 | ||
|association_with_transcript=22bp_to_S83365_5end | |association_with_transcript=22bp_to_S83365_5end | ||
|cluster_id=chr11:66055712..66055745,- | |||
|description=CAGE_peak_5_at_YIF1A_5end | |description=CAGE_peak_5_at_YIF1A_5end | ||
|id=chr11:66055712..66055745,- | |id=chr11:66055712..66055745,- | ||
|ontology_enrichment_celltype=CL:0000055!1.41e-11!180;CL:0002321!1.22e-10!248;CL:0000220!1.38e-10!246;CL:0000183!6.04e-08!59;CL:0000393!6.57e-07!60;CL:0000211!6.57e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.41e-11!180;CL:0002321!1.22e-10!248;CL:0000220!1.38e-10!246;CL:0000183!6.04e-08!59;CL:0000393!6.57e-07!60;CL:0000211!6.57e-07!60 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!6.62e-10!143;UBERON:0002100!8.58e-10!216;UBERON:0003102!9.20e-09!95;UBERON:0000490!1.18e-08!138;UBERON:0003104!9.00e-08!238;UBERON:0009142!9.00e-08!238;UBERON:0003914!1.43e-07!118;UBERON:0004290!2.55e-07!70;UBERON:0000475!5.38e-07!365;UBERON:0001134!8.57e-07!61;UBERON:0002036!8.57e-07!61;UBERON:0003082!8.57e-07!61;UBERON:0000914!9.82e-07!83;UBERON:0002329!9.82e-07!83;UBERON:0003077!9.82e-07!83;UBERON:0003059!9.82e-07!83;UBERON:0007282!9.82e-07!83;UBERON:0009618!9.82e-07!83;UBERON:0007285!9.82e-07!83 | |ontology_enrichment_uberon=UBERON:0005256!6.62e-10!143;UBERON:0002100!8.58e-10!216;UBERON:0003102!9.20e-09!95;UBERON:0000490!1.18e-08!138;UBERON:0003104!9.00e-08!238;UBERON:0009142!9.00e-08!238;UBERON:0003914!1.43e-07!118;UBERON:0004290!2.55e-07!70;UBERON:0000475!5.38e-07!365;UBERON:0001134!8.57e-07!61;UBERON:0002036!8.57e-07!61;UBERON:0003082!8.57e-07!61;UBERON:0000914!9.82e-07!83;UBERON:0002329!9.82e-07!83;UBERON:0003077!9.82e-07!83;UBERON:0003059!9.82e-07!83;UBERON:0007282!9.82e-07!83;UBERON:0009618!9.82e-07!83;UBERON:0007285!9.82e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0003513;1.92e-07;7!UBERON:0003688;3.80e-07;6!UBERON:0002358;3.80e-07;6!UBERON:0003684;3.80e-07;6!UBERON:0001178;3.80e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.82e-09,122;UBERON:0002100,1.89e-09,199;UBERON:0003688,2.12e-07,6;UBERON:0002358,2.12e-07,6;UBERON:0003684,2.12e-07,6;UBERON:0001178,2.12e-07,6;UBERON:0003513,3.77e-07,7;UBERON:0003104,6.37e-07,160;UBERON:0009142,6.37e-07,160;UBERON:0009569,8.02e-07,112;UBERON:0003914,8.46e-07,117 | |||
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|phase1_expression=2.54349730978779,0.856402095563933,2.53717927372748,0,3.12872766099101,2.61701557230111,10.1319951267324,1.26343974685366,0.522371256399677,0.245733936501509,3.48900583986214,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0.246242116153576,0,0.940364164434263,0.572471974262113,0.410623275218653,0.251085279189606,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0,0.919421224478927,2.10844143144775,0,0.0774672005803016,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0.209658645508376,0,0.300353785683013,0,0,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0.473447805734733,0,0.222820913770347,0,0,0,0.384273959177026,0,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0.361439152384566,2.00535164254356,0.434539556882471,0,0,0,0.221729397462564,0.351339142772504,0.261958150995425,0.364295288292542,0.370784442784429,0,0,0.398873881556595,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0,0.825354125820202,0.208994966536811,0.258416759169329,1.06729878806013,0,1.61131726843659,0.760272105718513,0.976248230192678,0,1.62028389576352,0.267899184852239,0,0,0,0,0.366403487860815,0,0,0,0,1.13967460498122,0,1.43418310374407,0.354668382198357,0.560677600142307,2.1349799145941,2.22000793575444,0.311211035399766,1.34710672069688,0.817309515567294,0.605429710579726,0.576175924479999,0.234321431833797,0.624320153660641,0.570471821544449,0.597794722207204,0.587172493218824,0,0.140450806702248,0.61246251376468,0.368502951935304,0.206651562351531,1.18800285728205,2.47266929278557,0,0,0,0.375355559615893,0.554128230968366,0,0.919463387397059,1.50238058906597,0.340296549480063,0.179389635688862,0.640672166455702,0,0.300091096084402,0.309157587715317,0.772921620136887,1.11670113798954,0.168776332241266,1.07180705677318,0,0.368199594569197,0,0.355009592516614,0.604512589365842,0.169560592310488,0.57978255948989,0.545492241181669,1.43402297694502,0.487894824518382,0.132529768321485,0.464775771478074,1.0366105501537,0.756962552626885,0,1.56449532329816,2.57296375277154,0,0.464367928031979,1.44375896333917,0.354920400119532,0.337169380156203,0.241011029883482,0.330881918197182,0,0.474541238222193,0.943819157121151,0,0.38474715694639,2.21446636387394,1.40241773803446,0.8231480226628,0,2.53510069643662,2.94848165003288,1.18157981336281,0,0.368965315629341,0,0.548751427043128,1.1240175325762,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0.702012795417713,0.148631162288728,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0.352193736052904,1.03664057770386,0.288239906833923,0.88369703398466,0,2.67391897890794,1.17217447210047,0,0.616964956219941,1.20137223137567,0.285826432630578,0.560655421726804,0.43596006883328,0,0.258543431515556,0,2.535908257668,0.531876233169741,2.08014873822732,1.28603687131071,0,0.266422179016099,0.428933980974443,1.62786481617433,0,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0.958499421966331,0,0,0.434343920002738,0.821905290201534,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,0,1.24900292158013,0.630809660135739,0.234282829985426,3.00946099727719,13.6444502433591,1.03473071292505,1.32845119707087,0,0.60818530127658,1.56640925970192,2.40200396667599,0,0.431428401637234,0,4.54691357169389,1.66435439510497,0.30239029332968,2.23297027036899,0,1.68396056659844,1.79394808957981,2.55853624533352,2.0911009748669,5.93672265779964,0.771048469013278,3.37367278094941,0.492762936082855,0,0.929683027679674,3.98836183652353,4.61164881697555,1.65745780084613,1.26295892981067,0.546273504020151,2.36023946926963,0.451199612907412,0.15403067420883,0.784349769176855,0,0,1.13733384070897,0.510281115829547,0,1.54227252690289,0.541892875087706,2.50844886927427,0,0,0,0,0,0,0.328014645699706,0.976135183992909,1.44257416306811,0.27470839445503,0,1.14853107599234,0.650060246036521,0,0.773365746336976,1.07834031980251,0.767518373630648,0.137836572484531,1.18162269355101,0.290033387828457,0.681813019328807,0.267096106940212,1.81813406897076,0.192190067365106,0,0.50578890427775,5.57814659156743,0.31481234683064,0.6970372701606,0.308033580176089,1.06461206063404,0.869932992075073,1.11194531462352,1.43124886741991,0.744316738719335,0,0.190630193923825,0.255897791311334,0,0.318203247925937,1.56989728039846,0.359744915166629,1.09814811894422,0,1.2130948894399,1.58510321173008,0.842516912477962,0.975267478179181,1.21856744815642,1.05650146756755,0.136499911407986,2.4038923432131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| ||
|short_description=p5@YIF1A | |short_description=p5@YIF1A | ||
}} | }} |
Latest revision as of 13:38, 19 September 2015
Short description: | p5@YIF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_YIF1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_S83365_5end |
EntrezGene: | YIF1A |
HGNC: | 16688 |
UniProt: | O00606 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 1.82e-09 | 122 |
trunk | 1.89e-09 | 199 |
omentum | 2.12e-07 | 6 |
peritoneum | 2.12e-07 | 6 |
abdominal cavity | 2.12e-07 | 6 |
visceral peritoneum | 2.12e-07 | 6 |
trunk blood vessel | 3.77e-07 | 7 |
mesenchyme | 6.37e-07 | 160 |
entire embryonic mesenchyme | 6.37e-07 | 160 |
subdivision of trunk | 8.02e-07 | 112 |
epithelial tube | 8.46e-07 | 117 |