FFCP PHASE1:Hg19::chr3:112218257..112218268,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151888 | |EntrezGene=151888 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21087 | |HGNC=21087 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-52bp_to_ENST00000383680_5end | |association_with_transcript=-52bp_to_ENST00000383680_5end | ||
|cluster_id=chr3:112218257..112218268,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_4_at_BTLA_5end | |description=CAGE_peak_4_at_BTLA_5end | ||
|id=chr3:112218257..112218268,- | |id=chr3:112218257..112218268,- | ||
|ontology_enrichment_celltype=CL:0000542!4.74e-48!53;CL:0000051!4.74e-48!53;CL:0000838!4.65e-46!52;CL:0000945!2.54e-39!24;CL:0000826!2.54e-39!24;CL:0000236!3.24e-33!14;CL:0002087!1.34e-28!119;CL:0000738!4.72e-27!140;CL:0002031!3.69e-21!124;CL:0000037!5.14e-21!172;CL:0000566!5.14e-21!172;CL:0000988!3.29e-19!182;CL:0002032!2.07e-15!165;CL:0000837!2.07e-15!165;CL:0000791!3.70e-15!18;CL:0000789!3.70e-15!18;CL:0002420!3.70e-15!18;CL:0002419!3.70e-15!18;CL:0000790!3.70e-15!18;CL:0000625!6.31e-14!11;CL:0000084!3.07e-10!25;CL:0000827!3.07e-10!25;CL:0000784!2.40e-09!3;CL:0000842!2.93e-08!3 | |ontology_enrichment_celltype=CL:0000542!4.74e-48!53;CL:0000051!4.74e-48!53;CL:0000838!4.65e-46!52;CL:0000945!2.54e-39!24;CL:0000826!2.54e-39!24;CL:0000236!3.24e-33!14;CL:0002087!1.34e-28!119;CL:0000738!4.72e-27!140;CL:0002031!3.69e-21!124;CL:0000037!5.14e-21!172;CL:0000566!5.14e-21!172;CL:0000988!3.29e-19!182;CL:0002032!2.07e-15!165;CL:0000837!2.07e-15!165;CL:0000791!3.70e-15!18;CL:0000789!3.70e-15!18;CL:0002420!3.70e-15!18;CL:0002419!3.70e-15!18;CL:0000790!3.70e-15!18;CL:0000625!6.31e-14!11;CL:0000084!3.07e-10!25;CL:0000827!3.07e-10!25;CL:0000784!2.40e-09!3;CL:0000842!2.93e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;9.05e-56;24!CL:0000236;4.08e-50;13!CL:0000542;6.51e-21;53!CL:0000784;1.23e-16;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.88e-56,24;CL:0000826,7.88e-56,24;CL:0000236,4.36e-55,14;CL:0000838,2.55e-30,52;CL:0000542,1.14e-29,53;CL:0000051,1.14e-29,53;CL:0000784,1.23e-16,3;CL:0000738,5.91e-13,136;CL:0002087,7.29e-13,115;CL:0002031,3.70e-12,120;CL:0000037,1.24e-09,168;CL:0000988,6.46e-09,177;CL:0002032,4.84e-08,161;CL:0000837,4.84e-08,161 | |||
|ontology_enrichment_development_v019=CL:0000051;6.51e-21;53!UBERON:0004872;3.36e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;8.97e-07;1!DOID:0050177;8.97e-07;1!DOID:0050427;8.97e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,8.97e-07,1;DOID:0050177,8.97e-07,1;DOID:0050427,8.97e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.01e-19!15;UBERON:0000179!1.01e-19!15;UBERON:0000463!1.01e-19!15;UBERON:0004177!1.32e-09!7;UBERON:0002193!4.97e-08!112;UBERON:0002390!1.40e-07!102;UBERON:0003061!1.40e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.82e-16;15!UBERON:0000179;4.82e-16;15!UBERON:0000463;4.82e-16;15!UBERON:0002390;2.64e-13;32!UBERON:0004177;9.12e-10;5!UBERON:0005057;9.12e-10;5!UBERON:0002193;4.10e-08;42!UBERON:0002106;9.51e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.19e-16,15;UBERON:0000179,4.19e-16,15;UBERON:0000463,4.19e-16,15;UBERON:0004177,9.69e-12,7;UBERON:0005057,9.69e-12,7;UBERON:0002106,1.06e-07,3;UBERON:0004854,1.06e-07,3;UBERON:0009034,1.06e-07,3;UBERON:0002095,1.06e-07,3;UBERON:0004782,1.06e-07,3;UBERON:0003281,1.06e-07,3;UBERON:0009664,1.06e-07,3;UBERON:0002296,1.06e-07,3;UBERON:0005602,1.06e-07,3;UBERON:0001179,1.06e-07,3;UBERON:0006293,1.06e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88383224259225,5.25443772479653,6.13944094246698,0,0.383829398097213,0,0,0,0,0.387336002901508,0,0.587200878669695,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,12.3197371122926,18.0225741716503,21.3482220927253,22.6167017960249,17.6174234295845,18.9668305184979,19.8313461835459,22.8972901088487,5.69212969109448,5.87237189370939,3.82273228125229,0,0,0.263384084775077,0.590129310341499,0,0,0,0.32592226663359,1.4203434172042,0,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,1.33457906845854,1.87278579662799,0,1.13309342697566,1.53288197440768,0,0.506039384039006,0.95569624297229,0.651083453856419,1.90090408889675,0.903450714466637,0.639933055772092,0,0.236777252044017,0.821127996921047,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,3.33886874027479,5.14795419702115,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,1.52927441428475,1.70894156152249,1.90585420366231,3.70226045777575,1.94541993357815,1.08006287447623,0.79312517629427,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0.861593638227486,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53514772622714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78569444161722,1.16024198352439,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.968833647540092,1.05527014302958,0,0,0,0,0,1.21233695426258,0.215166616178029,0,0,0,0,0,0,0,0,0,2.41528552309231,4.16739039994203 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88383224259225,5.25443772479653,6.13944094246698,0,0.383829398097213,0,0,0,0,0.387336002901508,0,0.587200878669695,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,12.3197371122926,18.0225741716503,21.3482220927253,22.6167017960249,17.6174234295845,18.9668305184979,19.8313461835459,22.8972901088487,5.69212969109448,5.87237189370939,3.82273228125229,0,0,0.263384084775077,0.590129310341499,0,0,0,0.32592226663359,1.4203434172042,0,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,1.33457906845854,1.87278579662799,0,1.13309342697566,1.53288197440768,0,0.506039384039006,0.95569624297229,0.651083453856419,1.90090408889675,0.903450714466637,0.639933055772092,0,0.236777252044017,0.821127996921047,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,3.33886874027479,5.14795419702115,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,1.52927441428475,1.70894156152249,1.90585420366231,3.70226045777575,1.94541993357815,1.08006287447623,0.79312517629427,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0.861593638227486,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53514772622714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78569444161722,1.16024198352439,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.968833647540092,1.05527014302958,0,0,0,0,0,1.21233695426258,0.215166616178029,0,0,0,0,0,0,0,0,0,2.41528552309231,4.16739039994203 | ||
|short_description=p4@BTLA | |short_description=p4@BTLA | ||
}} | }} |
Latest revision as of 13:41, 19 September 2015
Short description: | p4@BTLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BTLA_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -52bp_to_ENST00000383680_5end |
EntrezGene: | BTLA |
HGNC: | 21087 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.88e-56 | 24 |
pro-B cell | 7.88e-56 | 24 |
B cell | 4.36e-55 | 14 |
lymphoid lineage restricted progenitor cell | 2.55e-30 | 52 |
lymphocyte | 1.14e-29 | 53 |
common lymphoid progenitor | 1.14e-29 | 53 |
plasmacytoid dendritic cell | 1.23e-16 | 3 |
leukocyte | 5.91e-13 | 136 |
nongranular leukocyte | 7.29e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 3.70e-12 | 120 |
hematopoietic stem cell | 1.24e-09 | 168 |
hematopoietic cell | 6.46e-09 | 177 |
hematopoietic oligopotent progenitor cell | 4.84e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.84e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 4.19e-16 | 15 |
haemolymphatic fluid | 4.19e-16 | 15 |
organism substance | 4.19e-16 | 15 |
hemopoietic organ | 9.69e-12 | 7 |
immune organ | 9.69e-12 | 7 |
spleen | 1.06e-07 | 3 |
gastrointestinal system mesentery | 1.06e-07 | 3 |
stomach region | 1.06e-07 | 3 |
mesentery | 1.06e-07 | 3 |
gastrointestinal system serosa | 1.06e-07 | 3 |
mesentery of stomach | 1.06e-07 | 3 |
gut mesentery | 1.06e-07 | 3 |
dorsal mesentery | 1.06e-07 | 3 |
dorsal mesogastrium | 1.06e-07 | 3 |
peritoneal cavity | 1.06e-07 | 3 |
spleen primordium | 1.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 8.97e-07 | 1 |
monogenic disease | 8.97e-07 | 1 |
xeroderma pigmentosum | 8.97e-07 | 1 |