FFCP PHASE1:Hg19::chrX:134975753..134975758,+: Difference between revisions
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|id=chrX:134975753..134975758,+
|short_description=p2@SAGE1
|description=CAGE_peak_2_at_SAGE1_5end
|association_with_transcript=-26bp_to_ENST00000535938,NM_018666,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55511 | |EntrezGene=55511 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30369 | |HGNC=30369 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXZ1 | |UniProt=Q9NXZ1 | ||
|association_with_transcript=-26bp_to_ENST00000535938,NM_018666,uc004ezh.2_5end | |||
|cluster_id=chrX:134975753..134975758,+ | |||
|coexpression_cluster_id=C158 | |||
|description=CAGE_peak_2_at_SAGE1_5end | |||
|id=chrX:134975753..134975758,+ | |||
|ontology_enrichment_celltype=CL:0000319!1.25e-09!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!5.05e-17!8;DOID:3030!1.25e-09!1;DOID:0060085!1.62e-09!1;DOID:3165!1.62e-09!1;DOID:0060121!1.62e-09!1;DOID:2438!1.62e-09!1;DOID:4418!1.62e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3119;2.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.00e-08,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;4.27e-34;3!UBERON:0001235;4.27e-34;3!UBERON:0006858;4.27e-34;3!UBERON:0000945;5.15e-21;5!UBERON:0010039;5.15e-21;5!UBERON:0001041;2.00e-08;14!UBERON:0001851;5.55e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,4.27e-34,3;UBERON:0001235,4.27e-34,3;UBERON:0006858,4.27e-34,3;UBERON:0000945,1.07e-13,8;UBERON:0010039,1.07e-13,8;UBERON:0001851,5.55e-08,15 | |||
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|short_description=p2@SAGE1 | |||
}} | }} |
Latest revision as of 13:49, 19 September 2015
Short description: | p2@SAGE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SAGE1_5end |
Coexpression cluster: | C158_adrenal_gastric_temporal_parietal_duodenum_caudate_putamen |
Association with transcript: | -26bp_to_ENST00000535938, NM_018666, uc004ezh.2_5end |
EntrezGene: | SAGE1 |
HGNC: | 30369 |
UniProt: | Q9NXZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 4.27e-34 | 3 |
adrenal cortex | 4.27e-34 | 3 |
adrenal/interrenal gland | 4.27e-34 | 3 |
stomach | 1.07e-13 | 8 |
food storage organ | 1.07e-13 | 8 |
cortex | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.00e-08 | 14 |