FFCP PHASE1:Hg19::chr7:76139925..76139937,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80761 | |EntrezGene=80761 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21444 | |HGNC=21444 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000394849_5end | |association_with_transcript=0bp_to_ENST00000394849_5end | ||
|cluster_id=chr7:76139925..76139937,+ | |||
|coexpression_cluster_id=C1193 | |coexpression_cluster_id=C1193 | ||
|description=CAGE_peak_2_at_UPK3B_5end | |description=CAGE_peak_2_at_UPK3B_5end | ||
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|ontology_enrichment_celltype=CL:0000066!2.14e-21!254;CL:0002076!2.74e-16!43;CL:0000223!1.71e-10!59;CL:0002251!2.55e-09!21;CL:0000077!4.60e-09!19;CL:0000076!1.81e-08!62;CL:0002368!9.16e-07!13 | |ontology_enrichment_celltype=CL:0000066!2.14e-21!254;CL:0002076!2.74e-16!43;CL:0000223!1.71e-10!59;CL:0002251!2.55e-09!21;CL:0000077!4.60e-09!19;CL:0000076!1.81e-08!62;CL:0002368!9.16e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000244;1.73e-10;4!CL:0000731;1.73e-10;4!CL:0000077;2.14e-09;19!CL:0002586;7.46e-08;3!CL:0002251;1.47e-07;20!CL:0002621;4.15e-07;3 | |ontology_enrichment_celltype_v019=CL:0000244;1.73e-10;4!CL:0000731;1.73e-10;4!CL:0000077;2.14e-09;19!CL:0002586;7.46e-08;3!CL:0002251;1.47e-07;20!CL:0002621;4.15e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.59e-16,253;CL:0000244,1.52e-10,4;CL:0000731,1.52e-10,4;CL:0000077,2.10e-09,19;CL:0002076,1.05e-08,42;CL:0002586,7.30e-08,3;CL:0002251,1.47e-07,20;CL:0002621,4.50e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!2.71e-14!106;DOID:0050687!2.68e-11!143;DOID:299!5.21e-11!25 | |ontology_enrichment_disease=DOID:305!2.71e-14!106;DOID:0050687!2.68e-11!143;DOID:299!5.21e-11!25 | ||
|ontology_enrichment_disease_v019=DOID:299;1.11e-13;25 | |ontology_enrichment_disease_v019=DOID:299;1.11e-13;25 | ||
|ontology_enrichment_disease_v019_2=DOID:299,1.71e-13,25;DOID:305,3.69e-10,106;DOID:0050687,4.20e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.70e-18!169;UBERON:0000925!4.70e-18!169;UBERON:0006595!4.70e-18!169;UBERON:0001004!1.55e-12!72;UBERON:0001007!3.60e-12!155;UBERON:0001555!3.60e-12!155;UBERON:0007026!3.60e-12!155;UBERON:0000077!6.90e-12!130;UBERON:0004921!1.71e-10!129;UBERON:0004185!1.71e-10!129;UBERON:0000065!2.46e-10!53;UBERON:0005911!2.91e-09!82;UBERON:0004923!1.47e-08!57;UBERON:0000344!3.19e-08!12;UBERON:0005910!5.42e-08!6;UBERON:0001041!8.29e-08!98;UBERON:0005181!9.28e-08!35;UBERON:0000161!1.76e-07!35;UBERON:0000365!2.99e-07!5;UBERON:0005178!4.57e-07!34;UBERON:0002224!4.57e-07!34 | |ontology_enrichment_uberon=UBERON:0004119!4.70e-18!169;UBERON:0000925!4.70e-18!169;UBERON:0006595!4.70e-18!169;UBERON:0001004!1.55e-12!72;UBERON:0001007!3.60e-12!155;UBERON:0001555!3.60e-12!155;UBERON:0007026!3.60e-12!155;UBERON:0000077!6.90e-12!130;UBERON:0004921!1.71e-10!129;UBERON:0004185!1.71e-10!129;UBERON:0000065!2.46e-10!53;UBERON:0005911!2.91e-09!82;UBERON:0004923!1.47e-08!57;UBERON:0000344!3.19e-08!12;UBERON:0005910!5.42e-08!6;UBERON:0001041!8.29e-08!98;UBERON:0005181!9.28e-08!35;UBERON:0000161!1.76e-07!35;UBERON:0000365!2.99e-07!5;UBERON:0005178!4.57e-07!34;UBERON:0002224!4.57e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.27e-12;5!UBERON:0000486;2.95e-11;12!UBERON:0005910;4.18e-10;6!UBERON:0000305;8.09e-09;7!UBERON:0005631;3.13e-08;10!UBERON:0000158;3.13e-08;10!UBERON:0001781;7.46e-08;3!UBERON:0001782;7.46e-08;3!UBERON:0000344;1.93e-07;20!UBERON:0001949;4.15e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000365;3.27e-12;5!UBERON:0000486;2.95e-11;12!UBERON:0005910;4.18e-10;6!UBERON:0000305;8.09e-09;7!UBERON:0005631;3.13e-08;10!UBERON:0000158;3.13e-08;10!UBERON:0001781;7.46e-08;3!UBERON:0001782;7.46e-08;3!UBERON:0000344;1.93e-07;20!UBERON:0001949;4.15e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.56e-12,5;UBERON:0005910,4.48e-10,6;UBERON:0004923,9.50e-10,66;UBERON:0005631,1.38e-09,14;UBERON:0000158,1.38e-09,14;UBERON:0000305,7.45e-09,7;UBERON:0004119,1.52e-08,160;UBERON:0000925,1.52e-08,160;UBERON:0006595,1.52e-08,160;UBERON:0001782,7.30e-08,3;UBERON:0005424,7.30e-08,3;UBERON:0004871,1.09e-07,8;UBERON:0000344,2.41e-07,20;UBERON:0001949,4.50e-07,3 | |||
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| ||
|short_description=p2@UPK3B | |short_description=p2@UPK3B | ||
}} | }} |
Latest revision as of 14:09, 19 September 2015
Short description: | p2@UPK3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UPK3B_5end |
Coexpression cluster: | C1193_mesothelioma_Mesothelial_Retinal_clear_amniotic_serous_Urothelial |
Association with transcript: | 0bp_to_ENST00000394849_5end |
EntrezGene: | UPK3B |
HGNC: | 21444 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.59e-16 | 253 |
transitional epithelial cell | 1.52e-10 | 4 |
urothelial cell | 1.52e-10 | 4 |
mesothelial cell | 2.10e-09 | 19 |
endo-epithelial cell | 1.05e-08 | 42 |
retinal pigment epithelial cell | 7.30e-08 | 3 |
epithelial cell of alimentary canal | 1.47e-07 | 20 |
gingival epithelial cell | 4.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.56e-12 | 5 |
transitional epithelium | 4.48e-10 | 6 |
organ component layer | 9.50e-10 | 66 |
extraembryonic membrane | 1.38e-09 | 14 |
membranous layer | 1.38e-09 | 14 |
amnion | 7.45e-09 | 7 |
endoderm-derived structure | 1.52e-08 | 160 |
endoderm | 1.52e-08 | 160 |
presumptive endoderm | 1.52e-08 | 160 |
pigmented layer of retina | 7.30e-08 | 3 |
presumptive retinal pigmented epithelium | 7.30e-08 | 3 |
somatic layer of lateral plate mesoderm | 1.09e-07 | 8 |
mucosa | 2.41e-07 | 20 |
gingival epithelium | 4.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.71e-13 | 25 |
carcinoma | 3.69e-10 | 106 |
cell type cancer | 4.20e-07 | 143 |