FFCP PHASE1:Hg19::chr10:82049311..82049330,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4143 | |EntrezGene=4143 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6903 | |HGNC=6903 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000372206_5end | |association_with_transcript=-18bp_to_ENST00000372206_5end | ||
|cluster_id=chr10:82049311..82049330,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_3_at_MAT1A_5end | |description=CAGE_peak_3_at_MAT1A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!5.06e-10!12;CL:0000417!5.06e-10!12;CL:0000668!5.06e-10!12;CL:0000414!5.06e-10!12;CL:0000412!5.06e-10!12;CL:0000182!5.06e-10!12;CL:0002619!4.60e-08!3 | |ontology_enrichment_celltype=CL:0000181!5.06e-10!12;CL:0000417!5.06e-10!12;CL:0000668!5.06e-10!12;CL:0000414!5.06e-10!12;CL:0000412!5.06e-10!12;CL:0000182!5.06e-10!12;CL:0002619!4.60e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.40e-38;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.40e-38;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.40e-38,12;CL:0000223,1.42e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.75e-31;11!UBERON:0009497;5.27e-26;13!UBERON:0001041;8.15e-15;30!UBERON:0003104;9.76e-11;31!CL:0000223;6.66e-07;58 | |ontology_enrichment_development_v019=UBERON:0004161;8.75e-31;11!UBERON:0009497;5.27e-26;13!UBERON:0001041;8.15e-15;30!UBERON:0003104;9.76e-11;31!CL:0000223;6.66e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;9.67e-40;19!UBERON:0006925;9.67e-40;19!UBERON:0002423;6.13e-30;25!UBERON:0002368;2.14e-24;33!UBERON:0002365;3.30e-23;31!UBERON:0002330;3.30e-23;31!UBERON:0000949;1.03e-21;43!UBERON:0001301;5.05e-11;1!UBERON:0002530;4.11e-09;57!UBERON:0005172;5.77e-09;52!UBERON:0005173;5.77e-09;52!UBERON:0002417;2.41e-08;58!UBERON:0000916;2.41e-08;58 | |ontology_enrichment_uberon_v019=UBERON:0002107;9.67e-40;19!UBERON:0006925;9.67e-40;19!UBERON:0002423;6.13e-30;25!UBERON:0002368;2.14e-24;33!UBERON:0002365;3.30e-23;31!UBERON:0002330;3.30e-23;31!UBERON:0000949;1.03e-21;43!UBERON:0001301;5.05e-11;1!UBERON:0002530;4.11e-09;57!UBERON:0005172;5.77e-09;52!UBERON:0005173;5.77e-09;52!UBERON:0002417;2.41e-08;58!UBERON:0000916;2.41e-08;58 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.68e-40,19;UBERON:0006925,9.68e-40,19;UBERON:0008836,9.68e-40,19;UBERON:0008835,3.58e-34,22;UBERON:0003894,3.58e-34,22;UBERON:0009854,1.22e-32,23;UBERON:0007499,6.13e-30,25;UBERON:0009497,6.13e-30,25;UBERON:0000015,6.13e-30,25;UBERON:0002423,6.13e-30,25;UBERON:0006235,6.13e-30,25;UBERON:0004161,6.13e-30,25;UBERON:0009856,9.60e-29,26;UBERON:0002368,7.15e-26,35;UBERON:0000949,4.90e-24,45;UBERON:0002365,6.36e-24,31;UBERON:0002330,6.36e-24,31;UBERON:0005172,2.29e-16,54;UBERON:0005173,2.29e-16,54;UBERON:0003929,2.58e-16,54;UBERON:0002530,9.06e-15,59;UBERON:0002417,1.38e-14,60;UBERON:0000916,1.38e-14,60;UBERON:0005911,1.98e-12,82;UBERON:0005177,8.90e-12,101;UBERON:0001301,5.05e-11,1;UBERON:0001041,1.48e-09,87;UBERON:0009569,1.14e-08,112;UBERON:0004921,4.90e-08,118;UBERON:0003914,9.34e-07,117 | |||
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| ||
|short_description=p3@MAT1A | |short_description=p3@MAT1A | ||
}} | }} |
Latest revision as of 15:08, 19 September 2015
Short description: | p3@MAT1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAT1A_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -18bp_to_ENST00000372206_5end |
EntrezGene: | MAT1A |
HGNC: | 6903 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.40e-38 | 12 |
endodermal cell | 1.42e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 9.68e-40 | 19 |
digestive gland | 9.68e-40 | 19 |
liver bud | 9.68e-40 | 19 |
hepatic diverticulum | 3.58e-34 | 22 |
liver primordium | 3.58e-34 | 22 |
digestive tract diverticulum | 1.22e-32 | 23 |
epithelial sac | 6.13e-30 | 25 |
epithelium of foregut-midgut junction | 6.13e-30 | 25 |
anatomical boundary | 6.13e-30 | 25 |
hepatobiliary system | 6.13e-30 | 25 |
foregut-midgut junction | 6.13e-30 | 25 |
septum transversum | 6.13e-30 | 25 |
sac | 9.60e-29 | 26 |
endocrine gland | 7.15e-26 | 35 |
endocrine system | 4.90e-24 | 45 |
exocrine gland | 6.36e-24 | 31 |
exocrine system | 6.36e-24 | 31 |
abdomen element | 2.29e-16 | 54 |
abdominal segment element | 2.29e-16 | 54 |
gut epithelium | 2.58e-16 | 54 |
gland | 9.06e-15 | 59 |
abdominal segment of trunk | 1.38e-14 | 60 |
abdomen | 1.38e-14 | 60 |
endo-epithelium | 1.98e-12 | 82 |
trunk region element | 8.90e-12 | 101 |
epididymis | 5.05e-11 | 1 |
foregut | 1.48e-09 | 87 |
subdivision of trunk | 1.14e-08 | 112 |
subdivision of digestive tract | 4.90e-08 | 118 |
epithelial tube | 9.34e-07 | 117 |