FFCP PHASE1:Hg19::chr10:82173423..82173439,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84293 | |EntrezGene=84293 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28651 | |HGNC=28651 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRX8 | |UniProt=Q9BRX8 | ||
|association_with_transcript=-135bp_to_NM_001243778,NM_001243782_5end | |association_with_transcript=-135bp_to_NM_001243778,NM_001243782_5end | ||
|cluster_id=chr10:82173423..82173439,+ | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_5_at_FAM213A_5end | |description=CAGE_peak_5_at_FAM213A_5end | ||
|id=chr10:82173423..82173439,+ | |id=chr10:82173423..82173439,+ | ||
|ontology_enrichment_celltype=CL:0002139!6.22e-20!24;CL:0000115!2.91e-16!35;CL:0002543!2.48e-15!6;CL:0000071!3.39e-12!18;CL:0002546!3.39e-12!18;CL:0002078!5.93e-12!44;CL:0005020!4.16e-10!6;CL:0002138!4.16e-10!6;CL:0005022!4.16e-10!6;CL:0002618!2.39e-08!3;CL:0000213!3.37e-08!57;CL:0000215!3.37e-08!57 | |ontology_enrichment_celltype=CL:0002139!6.22e-20!24;CL:0000115!2.91e-16!35;CL:0002543!2.48e-15!6;CL:0000071!3.39e-12!18;CL:0002546!3.39e-12!18;CL:0002078!5.93e-12!44;CL:0005020!4.16e-10!6;CL:0002138!4.16e-10!6;CL:0005022!4.16e-10!6;CL:0002618!2.39e-08!3;CL:0000213!3.37e-08!57;CL:0000215!3.37e-08!57 | ||
|ontology_enrichment_celltype_v019=CL:0002543;9.85e-59;6!CL:0002139;7.59e-37;24!CL:0000071;5.28e-28;18!CL:0000235;3.27e-22;6!CL:0000115;2.11e-21;36!CL:0002618;1.05e-19;3!CL:0002078;1.47e-17;45!CL:0000313;7.45e-16;1!CL:0000213;8.51e-15;58!CL:0000215;8.51e-15;58!CL:0002138;2.40e-10;6!CL:0000159;1.39e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,9.88e-59,6;CL:0002139,6.92e-37,24;CL:0000115,8.19e-31,36;CL:0000071,4.81e-28,18;CL:0002546,4.81e-28,18;CL:0002078,1.66e-24,45;CL:0000235,3.51e-22,6;CL:0002618,1.39e-19,3;CL:0000213,7.71e-19,58;CL:0000215,7.71e-19,58;CL:0000313,7.46e-16,1;CL:0005020,2.41e-10,6;CL:0002138,2.41e-10,6;CL:0005022,2.41e-10,6;CL:0000159,1.39e-08,2;CL:0000222,1.44e-08,121;CL:0000076,7.67e-08,63 | |||
|ontology_enrichment_development_v019=CL:0002546;5.28e-28;18!CL:0005022;2.40e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;7.45e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,7.46e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!3.39e-12!18;UBERON:0004638!3.39e-12!18;UBERON:0004852!3.39e-12!18;UBERON:0001638!6.81e-10!9;UBERON:0003920!6.81e-10!9;UBERON:0004582!6.81e-10!9;UBERON:0000487!1.54e-09!22;UBERON:0000200!4.92e-09!6;UBERON:0002465!3.18e-08!10;UBERON:0006914!4.11e-08!25;UBERON:0001473!1.89e-07!8;UBERON:0004536!1.89e-07!8;UBERON:0006558!1.89e-07!8;UBERON:0002771!5.71e-07!3;UBERON:0001869!5.85e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001638;3.02e-39;9!UBERON:0003920;3.02e-39;9!UBERON:0004582;3.02e-39;9!UBERON:0004638;5.28e-28;18!UBERON:0001986;5.28e-28;18!UBERON:0004852;5.28e-28;18!UBERON:0000487;6.85e-23;22!UBERON:0006914;3.98e-20;25!UBERON:0004911;7.45e-16;1!UBERON:0000490;2.80e-14;33!UBERON:0002066;3.16e-12;5!UBERON:0004909;1.39e-08;2!UBERON:0001473;5.56e-08;8!UBERON:0004536;5.56e-08;8!UBERON:0006558;5.56e-08;8!UBERON:0000055;2.08e-07;65!UBERON:0010260;3.44e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001638,3.02e-39,9;UBERON:0003920,3.02e-39,9;UBERON:0004582,3.02e-39,9;UBERON:0004638,4.81e-28,18;UBERON:0001986,4.81e-28,18;UBERON:0004852,4.81e-28,18;UBERON:0000487,6.35e-23,22;UBERON:0006914,3.73e-20,25;UBERON:0004911,7.46e-16,1;UBERON:0000055,1.26e-12,68;UBERON:0002066,3.75e-12,5;UBERON:0002049,6.46e-11,78;UBERON:0007798,6.46e-11,78;UBERON:0004909,1.39e-08,2;UBERON:0007500,2.15e-08,59;UBERON:0001981,2.15e-08,59;UBERON:0004537,2.15e-08,59;UBERON:0006965,2.15e-08,59;UBERON:0001473,5.56e-08,8;UBERON:0004536,5.56e-08,8;UBERON:0006558,5.56e-08,8;UBERON:0004535,1.35e-07,109;UBERON:0001009,2.26e-07,112;UBERON:0010260,3.78e-07,9 | |||
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|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531831842075461,0.238490624305342,0,0,0.39752481473341,0,0,0.56530794192401,0,0,0,1.55050055501597,0.71153252537342,1.00416183829401,0,1.52054421143703,0,0.735326160691737,0,1.07159673940896,1.34717623575702,0.563057402416611,1.53316637465883,2.84779697870439,2.38162267109529,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0.492434012174795,24.57044783962,11.4445994962321,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0.510281115829547,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.685946781900644,0,0.34945333648406,0,0,0,0,0,0,0,0,0.397429223405979,0.253243183823515,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0.546746009922222,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.366078794705889,0.1251909307065,0,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48722917110803,0,0,0,0,0,0,0.642292250964595,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0,0.253663240775627,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.328863867814245,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38245849865429,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@FAM213A | |short_description=p5@FAM213A | ||
}} | }} |
Latest revision as of 15:26, 19 September 2015
Short description: | p5@FAM213A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAM213A_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | -135bp_to_NM_001243778, NM_001243782_5end |
EntrezGene: | C10orf58 |
HGNC: | 28651 |
UniProt: | Q9BRX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 9.88e-59 | 6 |
endothelial cell of vascular tree | 6.92e-37 | 24 |
endothelial cell | 8.19e-31 | 36 |
blood vessel endothelial cell | 4.81e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.81e-28 | 18 |
meso-epithelial cell | 1.66e-24 | 45 |
macrophage | 3.51e-22 | 6 |
endothelial cell of umbilical vein | 1.39e-19 | 3 |
lining cell | 7.71e-19 | 58 |
barrier cell | 7.71e-19 | 58 |
serous secreting cell | 7.46e-16 | 1 |
lymphangioblast | 2.41e-10 | 6 |
endothelial cell of lymphatic vessel | 2.41e-10 | 6 |
vascular lymphangioblast | 2.41e-10 | 6 |
seromucus secreting cell | 1.39e-08 | 2 |
mesodermal cell | 1.44e-08 | 121 |
squamous epithelial cell | 7.67e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
vein | 3.02e-39 | 9 |
venous blood vessel | 3.02e-39 | 9 |
venous system | 3.02e-39 | 9 |
blood vessel endothelium | 4.81e-28 | 18 |
endothelium | 4.81e-28 | 18 |
cardiovascular system endothelium | 4.81e-28 | 18 |
simple squamous epithelium | 6.35e-23 | 22 |
squamous epithelium | 3.73e-20 | 25 |
epithelium of female gonad | 7.46e-16 | 1 |
vessel | 1.26e-12 | 68 |
umbilical vein | 3.75e-12 | 5 |
vasculature | 6.46e-11 | 78 |
vascular system | 6.46e-11 | 78 |
epithelium of gonad | 1.39e-08 | 2 |
epithelial tube open at both ends | 2.15e-08 | 59 |
blood vessel | 2.15e-08 | 59 |
blood vasculature | 2.15e-08 | 59 |
vascular cord | 2.15e-08 | 59 |
lymphatic vessel | 5.56e-08 | 8 |
lymph vasculature | 5.56e-08 | 8 |
lymphatic part of lymphoid system | 5.56e-08 | 8 |
cardiovascular system | 1.35e-07 | 109 |
circulatory system | 2.26e-07 | 112 |
umbilical blood vessel | 3.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 7.46e-16 | 1 |