FFCP PHASE1:Hg19::chr1:89150000..89150033,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5586 | |EntrezGene=5586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9406 | |HGNC=9406 | ||
|TSSclassifier=strong | |||
|UniProt=E9PES5 | |UniProt=E9PES5 | ||
|association_with_transcript=7bp_to_ENST00000370505_5end | |association_with_transcript=7bp_to_ENST00000370505_5end | ||
|cluster_id=chr1:89150000..89150033,+ | |||
|description=CAGE_peak_2_at_PKN2_5end | |description=CAGE_peak_2_at_PKN2_5end | ||
|id=chr1:89150000..89150033,+ | |id=chr1:89150000..89150033,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.58e-23!172;CL:0000566!1.58e-23!172;CL:0000738!1.14e-22!140;CL:0002032!5.15e-22!165;CL:0000837!5.15e-22!165;CL:0000988!3.08e-19!182;CL:0000763!5.67e-18!112;CL:0000049!5.67e-18!112;CL:0002087!1.75e-17!119;CL:0002031!2.13e-17!124;CL:0000766!3.09e-16!76;CL:0000860!2.96e-15!45;CL:0002009!2.61e-14!65;CL:0002057!3.79e-14!42;CL:0000557!4.04e-14!71;CL:0000839!1.94e-13!70;CL:0002194!2.11e-13!63;CL:0000576!2.11e-13!63;CL:0000040!2.11e-13!63;CL:0000559!2.11e-13!63 | |ontology_enrichment_celltype=CL:0000037!1.58e-23!172;CL:0000566!1.58e-23!172;CL:0000738!1.14e-22!140;CL:0002032!5.15e-22!165;CL:0000837!5.15e-22!165;CL:0000988!3.08e-19!182;CL:0000763!5.67e-18!112;CL:0000049!5.67e-18!112;CL:0002087!1.75e-17!119;CL:0002031!2.13e-17!124;CL:0000766!3.09e-16!76;CL:0000860!2.96e-15!45;CL:0002009!2.61e-14!65;CL:0002057!3.79e-14!42;CL:0000557!4.04e-14!71;CL:0000839!1.94e-13!70;CL:0002194!2.11e-13!63;CL:0000576!2.11e-13!63;CL:0000040!2.11e-13!63;CL:0000559!2.11e-13!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.78e-11;33!CL:0002057;7.78e-11;33!CL:0000576;1.94e-09;48!CL:0000473;1.59e-07;39!CL:0000234;1.59e-07;39!CL:0000766;3.10e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.35e-22,168;CL:0000738,1.59e-21,136;CL:0002032,1.04e-20,161;CL:0000837,1.04e-20,161;CL:0000988,9.56e-19,177;CL:0000763,1.01e-16,108;CL:0000049,1.01e-16,108;CL:0002087,2.14e-16,115;CL:0002031,2.55e-16,120;CL:0000766,3.63e-15,72;CL:0000860,3.26e-14,42;CL:0002057,3.26e-14,42;CL:0002009,3.00e-13,61;CL:0000557,4.54e-13,67;CL:0000839,2.13e-12,66;CL:0002194,2.39e-12,59;CL:0000576,2.39e-12,59;CL:0000040,2.39e-12,59;CL:0000559,2.39e-12,59;CL:0000473,1.01e-11,48;CL:0000234,1.01e-11,48 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-10;42!UBERON:0001041;8.60e-07;30 | |||
|ontology_enrichment_disease=DOID:0050687!9.51e-19!143;DOID:162!4.28e-17!235;DOID:14566!8.85e-16!239;DOID:305!1.47e-15!106;DOID:0050686!7.89e-07!137 | |ontology_enrichment_disease=DOID:0050687!9.51e-19!143;DOID:162!4.28e-17!235;DOID:14566!8.85e-16!239;DOID:305!1.47e-15!106;DOID:0050686!7.89e-07!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.29e-18,143;DOID:162,7.69e-17,235;DOID:14566,1.76e-15,239;DOID:305,1.80e-15,106 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.82e-13!102;UBERON:0003061!6.82e-13!102;UBERON:0001474!2.14e-11!86;UBERON:0002193!3.00e-11!112;UBERON:0002371!3.35e-10!80;UBERON:0004765!2.15e-08!101;UBERON:0001434!2.15e-08!101;UBERON:0002405!3.12e-08!115 | |ontology_enrichment_uberon=UBERON:0002390!6.82e-13!102;UBERON:0003061!6.82e-13!102;UBERON:0001474!2.14e-11!86;UBERON:0002193!3.00e-11!112;UBERON:0002371!3.35e-10!80;UBERON:0004765!2.15e-08!101;UBERON:0001434!2.15e-08!101;UBERON:0002405!3.12e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.56e-12,98;UBERON:0003061,6.56e-12,98;UBERON:0002193,1.88e-10,108;UBERON:0001474,2.03e-10,82;UBERON:0002371,3.04e-09,76;UBERON:0004765,1.49e-08,90;UBERON:0002405,4.01e-08,93;UBERON:0001434,9.67e-07,100 | |||
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| ||
|short_description=p2@PKN2 | |short_description=p2@PKN2 | ||
}} | }} |
Latest revision as of 15:41, 19 September 2015
Short description: | p2@PKN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PKN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000370505_5end |
EntrezGene: | PKN2 |
HGNC: | 9406 |
UniProt: | E9PES5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.35e-22 | 168 |
leukocyte | 1.59e-21 | 136 |
hematopoietic oligopotent progenitor cell | 1.04e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.04e-20 | 161 |
hematopoietic cell | 9.56e-19 | 177 |
myeloid cell | 1.01e-16 | 108 |
common myeloid progenitor | 1.01e-16 | 108 |
nongranular leukocyte | 2.14e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 2.55e-16 | 120 |
myeloid leukocyte | 3.63e-15 | 72 |
classical monocyte | 3.26e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.26e-14 | 42 |
macrophage dendritic cell progenitor | 3.00e-13 | 61 |
granulocyte monocyte progenitor cell | 4.54e-13 | 67 |
myeloid lineage restricted progenitor cell | 2.13e-12 | 66 |
monopoietic cell | 2.39e-12 | 59 |
monocyte | 2.39e-12 | 59 |
monoblast | 2.39e-12 | 59 |
promonocyte | 2.39e-12 | 59 |
defensive cell | 1.01e-11 | 48 |
phagocyte | 1.01e-11 | 48 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.56e-12 | 98 |
blood island | 6.56e-12 | 98 |
hemolymphoid system | 1.88e-10 | 108 |
bone element | 2.03e-10 | 82 |
bone marrow | 3.04e-09 | 76 |
skeletal element | 1.49e-08 | 90 |
immune system | 4.01e-08 | 93 |
skeletal system | 9.67e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.29e-18 | 143 |
cancer | 7.69e-17 | 235 |
disease of cellular proliferation | 1.76e-15 | 239 |
carcinoma | 1.80e-15 | 106 |