FFCP PHASE1:Hg19::chr18:44526744..44526774,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:44526744..44526774,+ to FFCP PHASE1:Hg19::chr18:44526744..44526774,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83473 | |EntrezGene=83473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25387 | |HGNC=25387 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IYT4,F8WBL0 | |UniProt=Q8IYT4,F8WBL0 | ||
|association_with_transcript=-12bp_to_ENST00000245121,ENST00000356157,ENST00000454462,NM_031303,uc002lco.2_5end | |||
|cluster_id=chr18:44526744..44526774,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_KATNAL2_5end | |||
|id=chr18:44526744..44526774,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.77e-16;5!CL:0000540;2.16e-08;6!CL:0000404;2.16e-08;6!CL:0002321;4.23e-08;15!CL:0000064;1.42e-07;3!CL:0000067;1.42e-07;3!CL:0005012;1.42e-07;3!CL:0002304;1.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.34e-16,5;CL:0000540,1.89e-08,6;CL:0000031,1.89e-08,6;CL:0000404,1.89e-08,6;CL:0000133,7.61e-08,59;CL:0000064,1.86e-07,3;CL:0000067,1.86e-07,3;CL:0005012,1.86e-07,3;CL:0002304,1.86e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;2.16e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.40e-08!82;UBERON:0003075!8.56e-08!86;UBERON:0007284!8.56e-08!86;UBERON:0005743!1.02e-07!86;UBERON:0000073!1.39e-07!94;UBERON:0001016!1.39e-07!94;UBERON:0002346!2.03e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.42e-07;3!UBERON:0001775;1.42e-07;3!UBERON:0007625;2.11e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.86e-07,3;UBERON:0001775,1.86e-07,3;UBERON:0007625,3.09e-07,11 | |||
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| |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.791300934685361,0.495065411840187,0.331397375727916,0,0.602694528023977,0,0,0.246242116153576,0,0,1.14494394852423,0,0.376627918784408,0.0764134057479513,0,0,0,0.383829398097213,0,0,0,0.369754010166788,0.154934401160603,0.710846162437108,0.587200878669695,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,1.1384259382189,0,0.382273228125229,1.32171328579026,0,1.05353633910031,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.289693037921647,0,0,1.13441780596881,1.55210578223795,0.527008714158756,8.51363990735132,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0,1.62028389576352,0.714397826272638,0.44905874525234,1.0135033243499,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.132409180813219,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,1.95157929807353,1.85541675650079,1.2781333715647,1.55491582523056,0.756962552626885,2.55484151353081,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.219500570817251,0,0,0,0,0,0,1.15930404975077,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0.581267877027924,0,0.492663237895943,0.088048434013226,0.207328115540772,0,0,0.190493682876507,0,0,0,0,0,0.285826432630578,0,0,0.1466765716419,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,1.42636905040718,0.289562613335158,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0.385076685522074,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.214840489736547,0.290033387828457,0.170453254832202,0.0890320356467374,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,1.58696134274089,0,0.318852545457645,0,0.5745161103971,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0.334330152832435,0.568272293612826,0,0.593929361665277,0,0,0.422008249231538,0,0,0.211125408127993,0.796991953004279,0.828851746593443,1.76352923497993,1.22722419002586,0,0,0.539210106883961,0,0,0,0,0,0,0.185536196323703,0,1.04171104434093,0.349839999984783,0,0,0,0,0,0,0.520874984799877,1.77148277162768,0.844175070377856,0,0.552896299656123,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,0,0,0.166211681900156,0,0,0,0,0.476809736941136,0,0.489698424477443,0,0.432777279484182,0,0,0,0,0.370691816839509,0.208843899010911,1.28062152663286,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0.901940516486955,0.829505531177977,0,0,0,0,0,0,0.347119476670262,0,0,0.698906672968121,0.343972064943233,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0.426905989478705,0,0.432271251462318,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,1.60753148465019,2.75078873194468,2.07720169014593,0,0.77380195455795,0.0607495566580247,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,1.19730191562487,0.164185041498678,0,0,0,0,0.904980694530854,1.05786081394152,0.171086837884329,0,0.533937062838473,4.08731193259131,1.65695622138878,0,0,0.121792598380896,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0,0.573409195690071,0.887432412294818,0.745156835296601,0.415045904808692,0,0,0,0,0.468334905806882,0.869526171664951,0.149254802886874,0,0,0,0,0.889811221596536,0,0,0,0.295710299979268,0,0,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0,0,0,0.214821114084977,0.464033759878494,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0.537266523244462,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0.567515953566836,0,0,0,0.127894371303652,0.215649622793364,0.629063767423586,0,0.33946505990805,0,0,0,0,4.41625772007019,1.60114149657094,0.705351887381368,0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| ||
|short_description=p5@KATNAL2 | |||
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Latest revision as of 15:43, 19 September 2015
Short description: | p5@KATNAL2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KATNAL2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -12bp_to_ENST00000245121, ENST00000356157, ENST00000454462, NM_031303, uc002lco.2_5end |
EntrezGene: | KATNAL2 |
HGNC: | 25387 |
UniProt: | Q8IYT4F8WBL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.34e-16 | 5 |
neuron | 1.89e-08 | 6 |
neuroblast | 1.89e-08 | 6 |
electrically signaling cell | 1.89e-08 | 6 |
neurectodermal cell | 7.61e-08 | 59 |
ciliated cell | 1.86e-07 | 3 |
ciliated epithelial cell | 1.86e-07 | 3 |
multi-ciliated epithelial cell | 1.86e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.86e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.86e-07 | 3 |
ciliary body | 1.86e-07 | 3 |
pigment epithelium of eye | 3.09e-07 | 11 |