FFCP PHASE1:Hg19::chr12:58212511..58212522,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:58212511..58212522,- to FFCP PHASE1:Hg19::chr12:58212511..58212522,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10677 | |EntrezGene=10677 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14188 | |HGNC=14188 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVU1 | |UniProt=F8VVU1 | ||
|association_with_transcript=-24bp_to_ENST00000549994_5end | |||
|cluster_id=chr12:58212511..58212522,- | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_1_at_AVIL_5end | |||
|id=chr12:58212511..58212522,- | |||
|ontology_enrichment_celltype=CL:0000242!5.94e-12!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.27e-37;2!CL:0000242;2.27e-37;2!CL:0000312;1.30e-15;5!CL:0000240;3.55e-13;6!CL:0000311;3.55e-13;6!CL:0000079;3.55e-13;6!CL:0000237;3.55e-13;6!CL:0000362;4.25e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.27e-37,2;CL:0000312,1.30e-15,5;CL:0000240,3.55e-13,6;CL:0000311,3.55e-13,6;CL:0000079,3.55e-13,6;CL:0000237,3.55e-13,6;CL:0000036,3.55e-13,6;CL:0000357,3.55e-13,6;CL:0000114,3.55e-13,6;CL:0000362,4.25e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.91e-19;1!CL:0000357;3.55e-13;6!CL:0000114;3.55e-13;6!UBERON:0006241;2.97e-07;3!UBERON:0003057;2.97e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!4.41e-16!3;UBERON:0005409!4.61e-10!35;UBERON:0005174!7.61e-10!5;UBERON:0001137!7.61e-10!5;UBERON:0007023!6.83e-09!115;UBERON:0000160!2.29e-08!27;UBERON:0000059!8.22e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;6.67e-33;4!UBERON:0000160;2.07e-16;17!UBERON:0005409;6.30e-13;22!UBERON:0004921;1.29e-07;33!UBERON:0000922;2.44e-07;49!UBERON:0002240;2.97e-07;3!UBERON:0005174;2.97e-07;3!UBERON:0002114;2.97e-07;2!UBERON:0001137;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,7.44e-33,4;UBERON:0000160,2.16e-16,17;UBERON:0005409,1.83e-11,25;UBERON:0002240,2.79e-07,3;UBERON:0005174,2.79e-07,3;UBERON:0001137,2.79e-07,3;UBERON:0002114,2.97e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01414721508784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,3.27292988662355,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,1.94832070211506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34167452903441,11.4487612602552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07824811396682,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,4.63044948647668,1.09279780251979,0,0,0,0.196308467114945,0.297046400327086,1.6906229103336,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0.813792356631477,0,0.805095174364105,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01414721508784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,3.27292988662355,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,1.94832070211506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34167452903441,11.4487612602552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07824811396682,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,4.63044948647668,1.09279780251979,0,0,0,0.196308467114945,0.297046400327086,1.6906229103336,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0.813792356631477,0,0.805095174364105,0 | ||
|short_description=p1@AVIL | |||
}} | }} |
Latest revision as of 16:48, 19 September 2015
Short description: | p1@AVIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AVIL_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | -24bp_to_ENST00000549994_5end |
EntrezGene: | AVIL |
HGNC: | 14188 |
UniProt: | F8VVU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.27e-37 | 2 |
keratinocyte | 1.30e-15 | 5 |
stratified squamous epithelial cell | 3.55e-13 | 6 |
keratin accumulating cell | 3.55e-13 | 6 |
stratified epithelial cell | 3.55e-13 | 6 |
keratinizing barrier epithelial cell | 3.55e-13 | 6 |
epithelial fate stem cell | 3.55e-13 | 6 |
stratified epithelial stem cell | 3.55e-13 | 6 |
surface ectodermal cell | 3.55e-13 | 6 |
epidermal cell | 4.25e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
small intestine | 7.44e-33 | 4 |
intestine | 2.16e-16 | 17 |
gastrointestinal system | 1.83e-11 | 25 |
spinal cord | 2.79e-07 | 3 |
dorsal region element | 2.79e-07 | 3 |
dorsum | 2.79e-07 | 3 |
duodenum | 2.97e-07 | 2 |