FFCP PHASE1:Hg19::chr11:67007477..67007493,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22992 | |EntrezGene=22992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13606 | |HGNC=13606 | ||
|TSSclassifier=strong | |||
|UniProt=D4QA03,E7EMR1,E9PIL6 | |UniProt=D4QA03,E7EMR1,E9PIL6 | ||
|association_with_transcript=-24bp_to_ENST00000308783,ENST00000446134,ENST00000530342_5end | |association_with_transcript=-24bp_to_ENST00000308783,ENST00000446134,ENST00000530342_5end | ||
|cluster_id=chr11:67007477..67007493,+ | |||
|coexpression_cluster_id=C22 | |coexpression_cluster_id=C22 | ||
|description=CAGE_peak_2_at_KDM2A_5end | |description=CAGE_peak_2_at_KDM2A_5end | ||
|id=chr11:67007477..67007493,+ | |id=chr11:67007477..67007493,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.78e-17!140;CL:0000037!2.42e-16!172;CL:0000566!2.42e-16!172;CL:0000988!7.85e-16!182;CL:0000542!3.63e-15!53;CL:0000051!3.63e-15!53;CL:0000838!5.71e-15!52;CL:0002032!9.23e-15!165;CL:0000837!9.23e-15!165;CL:0002087!6.73e-12!119;CL:0002031!8.85e-12!124;CL:0000063!5.29e-08!578;CL:0000003!1.24e-07!722;CL:0000945!1.73e-07!24;CL:0000826!1.73e-07!24;CL:0000084!4.07e-07!25;CL:0000827!4.07e-07!25;CL:0000236!7.13e-07!14 | |ontology_enrichment_celltype=CL:0000738!3.78e-17!140;CL:0000037!2.42e-16!172;CL:0000566!2.42e-16!172;CL:0000988!7.85e-16!182;CL:0000542!3.63e-15!53;CL:0000051!3.63e-15!53;CL:0000838!5.71e-15!52;CL:0002032!9.23e-15!165;CL:0000837!9.23e-15!165;CL:0002087!6.73e-12!119;CL:0002031!8.85e-12!124;CL:0000063!5.29e-08!578;CL:0000003!1.24e-07!722;CL:0000945!1.73e-07!24;CL:0000826!1.73e-07!24;CL:0000084!4.07e-07!25;CL:0000827!4.07e-07!25;CL:0000236!7.13e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000542;3.53e-09;53!CL:0000945;2.44e-07;24!CL:0000084;2.71e-07;25!CL:0000236;9.39e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.11e-17,136;CL:0000037,5.55e-16,168;CL:0000988,3.45e-15,177;CL:0000542,3.57e-15,53;CL:0000051,3.57e-15,53;CL:0000838,5.62e-15,52;CL:0002032,2.07e-14,161;CL:0000837,2.07e-14,161;CL:0002087,1.38e-11,115;CL:0002031,1.83e-11,120;CL:0000945,1.73e-07,24;CL:0000826,1.73e-07,24;CL:0000084,4.01e-07,25;CL:0000827,4.01e-07,25;CL:0000236,7.13e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;3.53e-09;53 | |||
|ontology_enrichment_disease=DOID:162!5.96e-09!235;DOID:14566!1.87e-08!239;DOID:305!1.87e-08!106;DOID:0050687!5.44e-08!143 | |ontology_enrichment_disease=DOID:162!5.96e-09!235;DOID:14566!1.87e-08!239;DOID:305!1.87e-08!106;DOID:0050687!5.44e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.03e-09,235;DOID:14566,1.89e-08,239;DOID:305,1.90e-08,106;DOID:0050687,5.51e-08,143 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@KDM2A | |short_description=p2@KDM2A | ||
}} | }} |
Latest revision as of 16:51, 19 September 2015
Short description: | p2@KDM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KDM2A_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -24bp_to_ENST00000308783, ENST00000446134, ENST00000530342_5end |
EntrezGene: | KDM2A |
HGNC: | 13606 |
UniProt: | D4QA03E7EMR1E9PIL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.11e-17 | 136 |
hematopoietic stem cell | 5.55e-16 | 168 |
hematopoietic cell | 3.45e-15 | 177 |
lymphocyte | 3.57e-15 | 53 |
common lymphoid progenitor | 3.57e-15 | 53 |
lymphoid lineage restricted progenitor cell | 5.62e-15 | 52 |
hematopoietic oligopotent progenitor cell | 2.07e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-14 | 161 |
nongranular leukocyte | 1.38e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.83e-11 | 120 |
lymphocyte of B lineage | 1.73e-07 | 24 |
pro-B cell | 1.73e-07 | 24 |
T cell | 4.01e-07 | 25 |
pro-T cell | 4.01e-07 | 25 |
B cell | 7.13e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.03e-09 | 235 |
disease of cellular proliferation | 1.89e-08 | 239 |
carcinoma | 1.90e-08 | 106 |
cell type cancer | 5.51e-08 | 143 |