FFCP PHASE1:Hg19::chr14:33202467..33202483,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9472 | |EntrezGene=9472 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=376 | |HGNC=376 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000556540_5end | |association_with_transcript=0bp_to_ENST00000556540_5end | ||
|cluster_id=chr14:33202467..33202483,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_20_at_AKAP6_5end | |description=CAGE_peak_20_at_AKAP6_5end | ||
|id=chr14:33202467..33202483,+ | |id=chr14:33202467..33202483,+ | ||
|ontology_enrichment_celltype=CL:0002605!8.25e-20!3;CL:0000128!8.77e-09!7;CL:0000126!8.77e-09!7;CL:0000127!8.77e-09!7;CL:0002453!8.77e-09!7;CL:0002319!4.57e-08!25;CL:0000047!7.34e-08!8 | |ontology_enrichment_celltype=CL:0002605!8.25e-20!3;CL:0000128!8.77e-09!7;CL:0000126!8.77e-09!7;CL:0000127!8.77e-09!7;CL:0002453!8.77e-09!7;CL:0002319!4.57e-08!25;CL:0000047!7.34e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;5.69e-21;2!CL:0000540;6.78e-08;6!CL:0000404;6.78e-08;6!CL:0002319;7.45e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.92e-21,8;CL:0000540,6.78e-08,6;CL:0000031,6.78e-08,6;CL:0000404,6.78e-08,6;CL:0002319,7.24e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.48e-118;3!CL:0000031;6.78e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;9.96e-60;6!UBERON:0002680;3.32e-40;9!UBERON:0001895;3.32e-40;9!UBERON:0004733;2.00e-30;12!UBERON:0002028;2.00e-30;12!UBERON:0004732;3.65e-28;13 | |||
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|short_description=p20@AKAP6 | |short_description=p20@AKAP6 | ||
}} | }} |
Latest revision as of 18:01, 19 September 2015
Short description: | p20@AKAP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_AKAP6_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000556540_5end |
EntrezGene: | AKAP6 |
HGNC: | 376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.92e-21 | 8 |
neuron | 6.78e-08 | 6 |
neuroblast | 6.78e-08 | 6 |
electrically signaling cell | 6.78e-08 | 6 |
neural cell | 7.24e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.22e-59 | 6 |
rhombic lip | 1.22e-59 | 6 |
regional part of metencephalon | 3.80e-40 | 9 |
metencephalon | 3.80e-40 | 9 |
future metencephalon | 3.80e-40 | 9 |
segmental subdivision of hindbrain | 2.22e-30 | 12 |
hindbrain | 2.22e-30 | 12 |
presumptive hindbrain | 2.22e-30 | 12 |
segmental subdivision of nervous system | 4.00e-28 | 13 |
posterior neural tube | 1.65e-24 | 15 |
chordal neural plate | 1.65e-24 | 15 |
central nervous system | 1.45e-12 | 81 |
nervous system | 2.13e-11 | 89 |
regional part of nervous system | 2.08e-07 | 53 |
regional part of brain | 2.08e-07 | 53 |
neural tube | 4.68e-07 | 56 |
neural rod | 4.68e-07 | 56 |
future spinal cord | 4.68e-07 | 56 |
neural keel | 4.68e-07 | 56 |