FFCP PHASE1:Hg19::chr1:201438282..201438365,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23612 | |EntrezGene=23612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8934 | |HGNC=8934 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5J5 | |UniProt=Q9Y5J5 | ||
|association_with_transcript=0bp_to_ENST00000367309,ENST00000367311,NM_012396,uc001gwq.2_5end | |association_with_transcript=0bp_to_ENST00000367309,ENST00000367311,NM_012396,uc001gwq.2_5end | ||
|cluster_id=chr1:201438282..201438365,- | |||
|coexpression_cluster_id=C3919 | |||
|description=CAGE_peak_1_at_PHLDA3_5end | |description=CAGE_peak_1_at_PHLDA3_5end | ||
|id=chr1:201438282..201438365,- | |id=chr1:201438282..201438365,- | ||
|ontology_enrichment_celltype=CL:0000055!3.77e-23!180;CL:0002321!6.61e-13!248;CL:0000220!1.02e-12!246;CL:0000222!1.14e-12!119;CL:0000183!1.62e-11!59;CL:0000680!6.27e-11!57;CL:0000056!6.27e-11!57;CL:0000355!6.27e-11!57;CL:0000187!1.45e-10!54;CL:0000057!1.50e-10!75;CL:0000393!3.83e-10!60;CL:0000211!3.83e-10!60;CL:0000192!1.20e-09!42;CL:0000514!1.20e-09!42;CL:0000325!8.20e-09!39;CL:0000136!1.01e-08!15;CL:0000359!1.30e-07!32 | |ontology_enrichment_celltype=CL:0000055!3.77e-23!180;CL:0002321!6.61e-13!248;CL:0000220!1.02e-12!246;CL:0000222!1.14e-12!119;CL:0000183!1.62e-11!59;CL:0000680!6.27e-11!57;CL:0000056!6.27e-11!57;CL:0000355!6.27e-11!57;CL:0000187!1.45e-10!54;CL:0000057!1.50e-10!75;CL:0000393!3.83e-10!60;CL:0000211!3.83e-10!60;CL:0000192!1.20e-09!42;CL:0000514!1.20e-09!42;CL:0000325!8.20e-09!39;CL:0000136!1.01e-08!15;CL:0000359!1.30e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000136;8.71e-09;13!CL:0000192;2.00e-07;43!CL:0000359;3.15e-07;32!CL:0000349;8.12e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.91e-13,250;CL:0000222,6.67e-13,121;CL:0000680,1.78e-11,58;CL:0000056,1.78e-11,58;CL:0000355,1.78e-11,58;CL:0000187,4.12e-11,55;CL:0000057,8.00e-11,76;CL:0000393,1.15e-10,61;CL:0000211,1.15e-10,61;CL:0000192,3.31e-10,43;CL:0000514,3.31e-10,43;CL:0000136,9.31e-09,15;CL:0000359,1.21e-07,32;CL:0000349,7.60e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;2.00e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.27e-14!365;UBERON:0000914!7.84e-12!83;UBERON:0002329!7.84e-12!83;UBERON:0003077!7.84e-12!83;UBERON:0003059!7.84e-12!83;UBERON:0007282!7.84e-12!83;UBERON:0009618!7.84e-12!83;UBERON:0007285!7.84e-12!83;UBERON:0002100!9.16e-12!216;UBERON:0005256!1.04e-11!143;UBERON:0004872!1.53e-11!84;UBERON:0000486!2.53e-11!82;UBERON:0004290!1.65e-10!70;UBERON:0000483!1.82e-10!309;UBERON:0000468!2.21e-10!659;UBERON:0000119!3.30e-10!312;UBERON:0001134!4.79e-10!61;UBERON:0002036!4.79e-10!61;UBERON:0003082!4.79e-10!61;UBERON:0002385!1.31e-09!63;UBERON:0001015!1.31e-09!63;UBERON:0000383!1.31e-09!63;UBERON:0000477!2.89e-09!286;UBERON:0001637!6.23e-09!42;UBERON:0003509!6.23e-09!42;UBERON:0004572!6.23e-09!42;UBERON:0003914!6.50e-09!118;UBERON:0000481!7.46e-09!347;UBERON:0001981!2.70e-08!60;UBERON:0007500!2.70e-08!60;UBERON:0004537!2.70e-08!60;UBERON:0006965!2.70e-08!60;UBERON:0003104!6.24e-08!238;UBERON:0009142!6.24e-08!238;UBERON:0004111!7.05e-08!241;UBERON:0002049!7.07e-08!79;UBERON:0007798!7.07e-08!79;UBERON:0000055!7.25e-08!69;UBERON:0003102!1.28e-07!95;UBERON:0000480!3.73e-07!626;UBERON:0000467!3.79e-07!625;UBERON:0004573!4.95e-07!33;UBERON:0004571!4.95e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,5.25e-12,78;UBERON:0000486,7.88e-12,83;UBERON:0003104,2.63e-11,160;UBERON:0009142,2.63e-11,160;UBERON:0007524,2.65e-11,73;UBERON:0004872,2.82e-11,83;UBERON:0000483,4.40e-11,306;UBERON:0002329,5.13e-11,71;UBERON:0003059,5.13e-11,71;UBERON:0007282,5.13e-11,71;UBERON:0004290,5.13e-11,71;UBERON:0009618,5.13e-11,71;UBERON:0003077,5.77e-11,72;UBERON:0007285,5.77e-11,72;UBERON:0000119,8.22e-11,309;UBERON:0001134,1.46e-10,62;UBERON:0002036,1.46e-10,62;UBERON:0003082,1.46e-10,62;UBERON:0002385,4.11e-10,64;UBERON:0001015,4.11e-10,64;UBERON:0000383,4.11e-10,64;UBERON:0002100,8.24e-10,199;UBERON:0001637,5.71e-09,42;UBERON:0003509,5.71e-09,42;UBERON:0004572,5.71e-09,42;UBERON:0005256,5.87e-09,122;UBERON:0003914,1.20e-08,117;UBERON:0007500,5.02e-08,59;UBERON:0001981,5.02e-08,59;UBERON:0004537,5.02e-08,59;UBERON:0006965,5.02e-08,59;UBERON:0003102,9.21e-08,99;UBERON:0002049,1.24e-07,78;UBERON:0007798,1.24e-07,78;UBERON:0000055,1.30e-07,68;UBERON:0004111,1.63e-07,240;UBERON:0001008,2.87e-07,48;UBERON:0006554,3.16e-07,47;UBERON:0000490,3.89e-07,148;UBERON:0004573,4.64e-07,33;UBERON:0004571,4.64e-07,33 | |||
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| ||
|short_description=p1@PHLDA3 | |short_description=p1@PHLDA3 | ||
}} | }} |
Latest revision as of 18:05, 19 September 2015
Short description: | p1@PHLDA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHLDA3_5end |
Coexpression cluster: | C3919_Placental_Wilms_Adipocyte_Osteoblast_Mesenchymal_Alveolar_Urothelial |
Association with transcript: | 0bp_to_ENST00000367309, ENST00000367311, NM_012396, uc001gwq.2_5end |
EntrezGene: | PHLDA3 |
HGNC: | 8934 |
UniProt: | Q9Y5J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.91e-13 | 250 |
mesodermal cell | 6.67e-13 | 121 |
muscle precursor cell | 1.78e-11 | 58 |
myoblast | 1.78e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.78e-11 | 58 |
muscle cell | 4.12e-11 | 55 |
fibroblast | 8.00e-11 | 76 |
electrically responsive cell | 1.15e-10 | 61 |
electrically active cell | 1.15e-10 | 61 |
smooth muscle cell | 3.31e-10 | 43 |
smooth muscle myoblast | 3.31e-10 | 43 |
fat cell | 9.31e-09 | 15 |
vascular associated smooth muscle cell | 1.21e-07 | 32 |
extraembryonic cell | 7.60e-07 | 19 |