FFCP PHASE2:Hg19::chr9:100700439..100700486,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:55363 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:1750...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=55363 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=17509 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9BXL5 | ||
|association_with_transcript=39bp_to_NM_197978,uc004axy.2_5end | |association_with_transcript=39bp_to_NM_197978,uc004axy.2_5end | ||
|cluster_id=chr9:100700439..100700486,- | |cluster_id=chr9:100700439..100700486,- | ||
Latest revision as of 18:08, 19 September 2015
| Short description: | p1@HEMGN |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_HEMGN_5end |
| Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
| Association with transcript: | 39bp_to_NM_197978, uc004axy.2_5end |
| EntrezGene: | HEMGN |
| HGNC: | 17509 |
| UniProt: | Q9BXL5 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@HEMGN |
|---|
0
500
1000
1500
2000
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 3.86e-10 | 168 |
| myeloid cell | 2.03e-09 | 108 |
| common myeloid progenitor | 2.03e-09 | 108 |
| hematopoietic cell | 4.24e-09 | 177 |
| hematopoietic oligopotent progenitor cell | 3.16e-08 | 161 |
| hematopoietic multipotent progenitor cell | 3.16e-08 | 161 |
| neutrophil | 3.63e-07 | 3 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| blood | 1.71e-19 | 15 |
| haemolymphatic fluid | 1.71e-19 | 15 |
| organism substance | 1.71e-19 | 15 |
| adult organism | 1.43e-09 | 114 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| myeloid leukemia | 1.25e-15 | 31 |
| leukemia | 1.19e-14 | 39 |
| chronic leukemia | 2.80e-13 | 8 |
| hematologic cancer | 2.78e-11 | 51 |
| immune system cancer | 2.78e-11 | 51 |
Showing 1 to 5 of 5 entries
