FFCP PHASE1:Hg19::chr6:110797789..110797797,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85413 | |EntrezGene=85413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20302 | |HGNC=20302 | ||
|TSSclassifier=strong | |||
|UniProt=B4E330 | |UniProt=B4E330 | ||
|association_with_transcript=18bp_to_ENST00000456137_5end | |association_with_transcript=18bp_to_ENST00000456137_5end | ||
|cluster_id=chr6:110797789..110797797,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_2_at_SLC22A16_5end | |description=CAGE_peak_2_at_SLC22A16_5end | ||
|id=chr6:110797789..110797797,- | |id=chr6:110797789..110797797,- | ||
|ontology_enrichment_celltype=CL:0000763!5.43e-27!112;CL:0000049!5.43e-27!112;CL:0000839!3.64e-17!70;CL:0000037!4.85e-16!172;CL:0000566!4.85e-16!172;CL:0002032!9.44e-16!165;CL:0000837!9.44e-16!165;CL:0002194!1.87e-15!63;CL:0000576!1.87e-15!63;CL:0000040!1.87e-15!63;CL:0000559!1.87e-15!63;CL:0000766!3.66e-15!76;CL:0002009!7.60e-15!65;CL:0000988!1.03e-14!182;CL:0000557!3.17e-13!71;CL:0000764!4.31e-09!2;CL:0000765!4.31e-09!2;CL:0000050!4.31e-09!2;CL:0000038!4.31e-09!2;CL:0000558!4.31e-09!2;CL:0000547!4.31e-09!2;CL:0000549!4.31e-09!2;CL:0000550!4.31e-09!2;CL:0000552!4.31e-09!2;CL:0002057!8.28e-08!42;CL:0002031!1.35e-07!124;CL:0000860!3.79e-07!45 | |ontology_enrichment_celltype=CL:0000763!5.43e-27!112;CL:0000049!5.43e-27!112;CL:0000839!3.64e-17!70;CL:0000037!4.85e-16!172;CL:0000566!4.85e-16!172;CL:0002032!9.44e-16!165;CL:0000837!9.44e-16!165;CL:0002194!1.87e-15!63;CL:0000576!1.87e-15!63;CL:0000040!1.87e-15!63;CL:0000559!1.87e-15!63;CL:0000766!3.66e-15!76;CL:0002009!7.60e-15!65;CL:0000988!1.03e-14!182;CL:0000557!3.17e-13!71;CL:0000764!4.31e-09!2;CL:0000765!4.31e-09!2;CL:0000050!4.31e-09!2;CL:0000038!4.31e-09!2;CL:0000558!4.31e-09!2;CL:0000547!4.31e-09!2;CL:0000549!4.31e-09!2;CL:0000550!4.31e-09!2;CL:0000552!4.31e-09!2;CL:0002057!8.28e-08!42;CL:0002031!1.35e-07!124;CL:0000860!3.79e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.11e-34;2!CL:0000558;1.11e-34;2!CL:0000037;1.12e-17;1!CL:0001024;1.12e-17;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.11e-34,2;CL:0000765,1.11e-34,2;CL:0000050,1.11e-34,2;CL:0000038,1.11e-34,2;CL:0000558,1.11e-34,2;CL:0000547,1.11e-34,2;CL:0000549,1.11e-34,2;CL:0000550,1.11e-34,2;CL:0000552,1.11e-34,2;CL:0001024,8.72e-18,1;CL:0000763,3.11e-09,108;CL:0000049,3.11e-09,108;CL:0000037,2.94e-07,168;CL:0000988,7.55e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!9.28e-18!31;DOID:1240!1.75e-13!39;DOID:2531!1.31e-09!51;DOID:0060083!1.31e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.55e-18;31!DOID:1240;1.30e-13;39!DOID:2531;3.48e-07;51!DOID:0060083;3.48e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.24e-19,31;DOID:1240,3.70e-15,39;DOID:2531,1.49e-11,51;DOID:0060083,1.49e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.25e-14!102;UBERON:0003061!4.25e-14!102;UBERON:0002371!9.44e-13!80;UBERON:0002193!2.47e-12!112;UBERON:0001474!1.53e-11!86;UBERON:0002405!1.65e-09!115;UBERON:0004765!3.71e-09!101;UBERON:0001434!3.71e-09!101;UBERON:0000341!5.54e-08!2 | |ontology_enrichment_uberon=UBERON:0002390!4.25e-14!102;UBERON:0003061!4.25e-14!102;UBERON:0002371!9.44e-13!80;UBERON:0002193!2.47e-12!112;UBERON:0001474!1.53e-11!86;UBERON:0002405!1.65e-09!115;UBERON:0004765!3.71e-09!101;UBERON:0001434!3.71e-09!101;UBERON:0000341!5.54e-08!2 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@SLC22A16 | |short_description=p2@SLC22A16 | ||
}} | }} |
Latest revision as of 19:44, 19 September 2015
Short description: | p2@SLC22A16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC22A16_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 18bp_to_ENST00000456137_5end |
EntrezGene: | SLC22A16 |
HGNC: | 20302 |
UniProt: | B4E330 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.11e-34 | 2 |
erythroblast | 1.11e-34 | 2 |
megakaryocyte-erythroid progenitor cell | 1.11e-34 | 2 |
erythroid progenitor cell | 1.11e-34 | 2 |
reticulocyte | 1.11e-34 | 2 |
proerythroblast | 1.11e-34 | 2 |
basophilic erythroblast | 1.11e-34 | 2 |
polychromatophilic erythroblast | 1.11e-34 | 2 |
orthochromatic erythroblast | 1.11e-34 | 2 |
CD34-positive, CD38-negative hematopoietic stem cell | 8.72e-18 | 1 |
myeloid cell | 3.11e-09 | 108 |
common myeloid progenitor | 3.11e-09 | 108 |
hematopoietic stem cell | 2.94e-07 | 168 |
hematopoietic cell | 7.55e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.24e-19 | 31 |
leukemia | 3.70e-15 | 39 |
hematologic cancer | 1.49e-11 | 51 |
immune system cancer | 1.49e-11 | 51 |