FFCP PHASE1:Hg19::chr12:64238539..64238600,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57522 | |EntrezGene=57522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17382 | |HGNC=17382 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z6B7 | |UniProt=Q7Z6B7 | ||
|association_with_transcript=0bp_to_ENST00000357825,ENST00000537556,NM_020762,uc001srt.2,uc010ssp.1_5end | |association_with_transcript=0bp_to_ENST00000357825,ENST00000537556,NM_020762,uc001srt.2,uc010ssp.1_5end | ||
|cluster_id=chr12:64238539..64238600,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_6_at_SRGAP1_5end | |description=CAGE_peak_6_at_SRGAP1_5end | ||
|id=chr12:64238539..64238600,+ | |id=chr12:64238539..64238600,+ | ||
|ontology_enrichment_celltype=CL:0000057!2.67e-11!75;CL:0000055!2.01e-10!180;CL:0002620!2.87e-07!23 | |ontology_enrichment_celltype=CL:0000057!2.67e-11!75;CL:0000055!2.01e-10!180;CL:0002620!2.87e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.95e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.10e-12,76;CL:0002620,4.02e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.19e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.26e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!9.80e-12!365;UBERON:0000468!1.24e-11!659;UBERON:0000467!2.64e-10!625;UBERON:0000480!4.33e-10!626;UBERON:0000062!7.45e-09!511;UBERON:0002100!3.58e-08!216;UBERON:0004458!4.61e-08!49;UBERON:0001007!1.81e-07!155;UBERON:0001555!1.81e-07!155;UBERON:0007026!1.81e-07!155;UBERON:0003102!2.98e-07!95;UBERON:0002553!2.99e-07!70;UBERON:0002323!3.20e-07!46;UBERON:0004119!8.30e-07!169;UBERON:0000925!8.30e-07!169;UBERON:0006595!8.30e-07!169;UBERON:0000481!8.56e-07!347 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004458,3.37e-09,49;UBERON:0002553,2.94e-08,61;UBERON:0002323,4.87e-08,46;UBERON:0003886,5.83e-08,54 | |||
|phase1_expression=2.36181893051724,0.856402095563933,1.69145284915165,2.00146596706261,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0.218441372130172,0.263766978228454,1.73272894144065,0,1.34465029290355,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,2.0036519099174,0.273748850145768,0.376627918784408,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,1.34349284543955,0.647787332037959,1.03030227053675,0.581592955118259,0.377875943688809,0,0,0.822335776043652,0.619412741790207,0,0,0,0.344745680736619,1.93645405075148,0,0.188242339542605,0.545812300115692,0.674170453335254,0,3.85114832491312,0,0.329851300186716,0,0,0.580418477257168,2.26954089876456,1.86846674698672,0,0.521482918420201,0,0.605399502633369,1.84138817993782,0.949387162322653,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.68280343881454,0.639312809217652,2.1686349143074,1.50401373190767,0.434539556882471,1.5905718941022,0,1.13441780596881,1.55210578223795,0.527008714158756,1.70272798147026,0,0,0,1.21890816109487,0.398873881556595,0,0,0,0.79504962946682,0,0,0.56530794192401,0,0,0.208994966536811,0.516833518338658,0.71153252537342,0.33472061276467,0,1.52054421143703,0,0,0.81014194788176,0.982297011124877,0.22452937262617,0.225222960966644,0,0.949265659568129,0,0,0,0.436094052142534,1.98788780678127,1.01304409331664,5.03154887090231,3.44203944898576,0,0,0,0,4.66816553099649,0.538842688278752,0.490385709340376,1.05950199351452,1.72852777344,0.70296429550139,0,0.570471821544449,1.34503812496621,0.704606991862589,0.809364721840658,0.140450806702248,3.26646674007829,0.859840221182376,1.03325781175765,2.37600571456411,1.48360157567134,0,0.718618141816238,1.17835279767846,1.12606667884768,2.21651292387346,0.877955241761676,2.45190236639216,1.05166641234618,0.453728732640084,1.97328599257748,1.92201649936711,5.29829752898905,2.40072876867522,4.94652140344507,3.09168648054755,2.79175284497385,4.38818463827292,1.16924406193438,5.04867548488229,5.52299391853796,5.98090410229604,2.4850671476163,1.30977727695932,1.18692414617341,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0.348581828608555,0,0,0,4.69348596989448,0,0,1.39310378409594,2.16563844500876,0.946454400318751,1.68584690078102,0.482022059766964,0.330881918197182,0,0,0.539325232640658,0.392442930250692,0.38474715694639,0,0,3.7041661019826,1.47008711385542,0,0,0,0,1.96781501668982,0.171567810298526,0.439001141634502,0,0.402115889646523,0.462942225792648,0.977424915930974,0,0,0.115930404975077,0.469634776943287,0.721832238805369,0.925971025153221,0.570762456703795,1.58040879591855,0,0.246217006087397,0.468008530278475,0.594524649154913,0,0.335964256397719,0.141775097242386,1.79117045405697,0.871901815541886,0.383382679165211,39.9057222695714,1.40877494421162,0,0,0.12624243342638,0.317489471460845,0.381988425558278,0,0,0.102827492703324,0.600686115687835,0.285826432630578,0.224262168690721,0.43596006883328,0.5867062865676,1.93907573636667,0,0.845302752556,2.6593811658487,0,0.257207374262142,0,0.266422179016099,0.714889968290738,1.08524321078289,0,0.325736184293735,0.355391948742546,0,3.61727252471503,0.871533458600294,1.09970290300263,1.2162378064119,0,0,0.239624855491583,0,1.42636905040718,1.88215698667853,2.4657158706046,1.96967059563885,0,0,0,0,1.27047312111232,0,3.09315525111078,0.502548796003046,1.27587750330633,0,0,0,0.981531933753119,0.500170521059677,0.271265023699736,1.45579603071565,2.85486382075459,1.73472656537328,1.05427273493442,2.10662269809403,0,1.03473071292505,1.32845119707087,0.553107505625109,2.25897397617015,1.37060810223918,0.686286847621712,0,0,0,0,0,0,3.47350930946288,3.06923946576125,0.561320188866147,2.17836553734692,0.511707249066704,0.965123526861645,0,1.3878872442239,1.77561725313127,1.8067974323038,1.03850885836724,0.697262270759755,1.20859449591622,0.200506470303285,0.736647911487171,1.14814448164607,0.910455840033585,0.917870904715969,0.902399225814824,0.847168708148562,0,1.46139224653261,1.37217117560738,0,0.340187410553031,0.863663664408557,0,3.52230368807009,2.50844886927427,0.254876273045038,0,0.223874754722178,0,0,0,0.328014645699706,0,0.824328093181778,0,0.165018999841176,0.574265537996172,0,3.21367859688319,2.32009723901093,1.07834031980251,1.68854042198743,0.827019434907183,3.97454906012612,2.75531718437034,1.70453254832202,2.67096106940212,0.826424576804891,0.576570202095319,3.57315594984836,0.6069466851333,0.464845549297286,2.20368642781448,0,1.23213432070436,0.532306030317022,1.73986598415015,0.37064843820784,0.572499546967965,0.744316738719335,0.632758849437452,1.14378116354295,0.255897791311334,0.855877976067841,1.59101623962968,0,3.23770423649967,1.64722217841633,1.88499843753098,0.202182481573316,0,0.421258456238981,0.975267478179181,0.731140468893853,0,0.409499734223957,1.1312434556297,0,1.65409603063837,0,0,0.578775534266688,1.9676842561399,0,0,0.281695602532241,0.2868227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|phase1_expression=2.36181893051724,0.856402095563933,1.69145284915165,2.00146596706261,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0.218441372130172,0.263766978228454,1.73272894144065,0,1.34465029290355,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,2.0036519099174,0.273748850145768,0.376627918784408,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,1.34349284543955,0.647787332037959,1.03030227053675,0.581592955118259,0.377875943688809,0,0,0.822335776043652,0.619412741790207,0,0,0,0.344745680736619,1.93645405075148,0,0.188242339542605,0.545812300115692,0.674170453335254,0,3.85114832491312,0,0.329851300186716,0,0,0.580418477257168,2.26954089876456,1.86846674698672,0,0.521482918420201,0,0.605399502633369,1.84138817993782,0.949387162322653,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.68280343881454,0.639312809217652,2.1686349143074,1.50401373190767,0.434539556882471,1.5905718941022,0,1.13441780596881,1.55210578223795,0.527008714158756,1.70272798147026,0,0,0,1.21890816109487,0.398873881556595,0,0,0,0.79504962946682,0,0,0.56530794192401,0,0,0.208994966536811,0.516833518338658,0.71153252537342,0.33472061276467,0,1.52054421143703,0,0,0.81014194788176,0.982297011124877,0.22452937262617,0.225222960966644,0,0.949265659568129,0,0,0,0.436094052142534,1.98788780678127,1.01304409331664,5.03154887090231,3.44203944898576,0,0,0,0,4.66816553099649,0.538842688278752,0.490385709340376,1.05950199351452,1.72852777344,0.70296429550139,0,0.570471821544449,1.34503812496621,0.704606991862589,0.809364721840658,0.140450806702248,3.26646674007829,0.859840221182376,1.03325781175765,2.37600571456411,1.48360157567134,0,0.718618141816238,1.17835279767846,1.12606667884768,2.21651292387346,0.877955241761676,2.45190236639216,1.05166641234618,0.453728732640084,1.97328599257748,1.92201649936711,5.29829752898905,2.40072876867522,4.94652140344507,3.09168648054755,2.79175284497385,4.38818463827292,1.16924406193438,5.04867548488229,5.52299391853796,5.98090410229604,2.4850671476163,1.30977727695932,1.18692414617341,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0.348581828608555,0,0,0,4.69348596989448,0,0,1.39310378409594,2.16563844500876,0.946454400318751,1.68584690078102,0.482022059766964,0.330881918197182,0,0,0.539325232640658,0.392442930250692,0.38474715694639,0,0,3.7041661019826,1.47008711385542,0,0,0,0,1.96781501668982,0.171567810298526,0.439001141634502,0,0.402115889646523,0.462942225792648,0.977424915930974,0,0,0.115930404975077,0.469634776943287,0.721832238805369,0.925971025153221,0.570762456703795,1.58040879591855,0,0.246217006087397,0.468008530278475,0.594524649154913,0,0.335964256397719,0.141775097242386,1.79117045405697,0.871901815541886,0.383382679165211,39.9057222695714,1.40877494421162,0,0,0.12624243342638,0.317489471460845,0.381988425558278,0,0,0.102827492703324,0.600686115687835,0.285826432630578,0.224262168690721,0.43596006883328,0.5867062865676,1.93907573636667,0,0.845302752556,2.6593811658487,0,0.257207374262142,0,0.266422179016099,0.714889968290738,1.08524321078289,0,0.325736184293735,0.355391948742546,0,3.61727252471503,0.871533458600294,1.09970290300263,1.2162378064119,0,0,0.239624855491583,0,1.42636905040718,1.88215698667853,2.4657158706046,1.96967059563885,0,0,0,0,1.27047312111232,0,3.09315525111078,0.502548796003046,1.27587750330633,0,0,0,0.981531933753119,0.500170521059677,0.271265023699736,1.45579603071565,2.85486382075459,1.73472656537328,1.05427273493442,2.10662269809403,0,1.03473071292505,1.32845119707087,0.553107505625109,2.25897397617015,1.37060810223918,0.686286847621712,0,0,0,0,0,0,3.47350930946288,3.06923946576125,0.561320188866147,2.17836553734692,0.511707249066704,0.965123526861645,0,1.3878872442239,1.77561725313127,1.8067974323038,1.03850885836724,0.697262270759755,1.20859449591622,0.200506470303285,0.736647911487171,1.14814448164607,0.910455840033585,0.917870904715969,0.902399225814824,0.847168708148562,0,1.46139224653261,1.37217117560738,0,0.340187410553031,0.863663664408557,0,3.52230368807009,2.50844886927427,0.254876273045038,0,0.223874754722178,0,0,0,0.328014645699706,0,0.824328093181778,0,0.165018999841176,0.574265537996172,0,3.21367859688319,2.32009723901093,1.07834031980251,1.68854042198743,0.827019434907183,3.97454906012612,2.75531718437034,1.70453254832202,2.67096106940212,0.826424576804891,0.576570202095319,3.57315594984836,0.6069466851333,0.464845549297286,2.20368642781448,0,1.23213432070436,0.532306030317022,1.73986598415015,0.37064843820784,0.572499546967965,0.744316738719335,0.632758849437452,1.14378116354295,0.255897791311334,0.855877976067841,1.59101623962968,0,3.23770423649967,1.64722217841633,1.88499843753098,0.202182481573316,0,0.421258456238981,0.975267478179181,0.731140468893853,0,0.409499734223957,1.1312434556297,0,1.65409603063837,0,0,0.578775534266688,1.9676842561399,0,0,0.281695602532241,0.2868227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| ||
|short_description=p6@SRGAP1 | |short_description=p6@SRGAP1 | ||
}} | }} |
Latest revision as of 19:56, 19 September 2015
Short description: | p6@SRGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SRGAP1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000357825, ENST00000537556, NM_020762, uc001srt.2, uc010ssp.1_5end |
EntrezGene: | SRGAP1 |
HGNC: | 17382 |
UniProt: | Q7Z6B7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.10e-12 | 76 |
skin fibroblast | 4.02e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
body cavity or lining | 3.37e-09 | 49 |
anatomical cavity | 2.94e-08 | 61 |
body cavity | 4.87e-08 | 46 |
body cavity precursor | 5.83e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.26e-07 | 14 |