FFCP PHASE1:Hg19::chr11:68458387..68458424,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51083 | |EntrezGene=51083 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4114 | |HGNC=4114 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2S1 | |UniProt=Q9Y2S1 | ||
|association_with_transcript=461bp_to_AF077047_5end | |association_with_transcript=461bp_to_AF077047_5end | ||
|cluster_id=chr11:68458387..68458424,+ | |||
|coexpression_cluster_id=C196 | |coexpression_cluster_id=C196 | ||
|description=CAGE_peak_3_at_GAL_5end | |description=CAGE_peak_3_at_GAL_5end | ||
|id=chr11:68458387..68458424,+ | |id=chr11:68458387..68458424,+ | ||
|ontology_enrichment_celltype=CL:0000039!4.40e-11!7;CL:0000586!4.40e-11!7;CL:0000235!1.41e-09!10;CL:0000066!8.45e-09!254;CL:0002322!1.10e-07!5;CL:0002150!4.47e-07!3;CL:0000861!4.47e-07!3 | |ontology_enrichment_celltype=CL:0000039!4.40e-11!7;CL:0000586!4.40e-11!7;CL:0000235!1.41e-09!10;CL:0000066!8.45e-09!254;CL:0002322!1.10e-07!5;CL:0002150!4.47e-07!3;CL:0000861!4.47e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.05e-25;7!CL:0000586;1.05e-25;7!CL:0000540;1.48e-17;6!CL:0000404;1.48e-17;6!CL:0002144;1.42e-15;3!CL:0002322;1.01e-09;5!CL:0002321;3.28e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.05e-25,7;CL:0000586,1.05e-25,7;CL:0000540,1.09e-17,6;CL:0000031,1.09e-17,6;CL:0000404,1.09e-17,6;CL:0002144,1.42e-15,3;CL:0000047,2.03e-13,8;CL:0002322,1.21e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.27e-18;10!UBERON:0005564;4.27e-18;10!CL:0000031;1.48e-17;6 | |||
|ontology_enrichment_disease=DOID:3095!1.29e-11!22;DOID:2994!1.29e-11!22;DOID:0050687!8.92e-11!143;DOID:305!9.49e-10!106;DOID:162!1.19e-07!235;DOID:14566!2.88e-07!239 | |ontology_enrichment_disease=DOID:3095!1.29e-11!22;DOID:2994!1.29e-11!22;DOID:0050687!8.92e-11!143;DOID:305!9.49e-10!106;DOID:162!1.19e-07!235;DOID:14566!2.88e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.21e-12;22!DOID:2994;1.21e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.18e-12,22;DOID:2994,1.18e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.02e-15!9;UBERON:0003101!3.01e-08!22;UBERON:0000079!3.01e-08!22;UBERON:0000473!2.04e-07!8 | |ontology_enrichment_uberon=UBERON:0001737!4.02e-15!9;UBERON:0003101!3.01e-08!22;UBERON:0000079!3.01e-08!22;UBERON:0000473!2.04e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.54e-22;8!UBERON:0003135;1.77e-16;11!UBERON:0010523;1.42e-15;3!UBERON:0001915;1.42e-15;3!UBERON:0001982;1.42e-15;3!UBERON:0003101;1.21e-12;22!UBERON:0000079;1.21e-12;22!UBERON:0000991;9.68e-09;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.55e-22,8;UBERON:0003135,1.77e-16,11;UBERON:0010523,1.42e-15,3;UBERON:0001915,1.42e-15,3;UBERON:0001982,1.42e-15,3;UBERON:0003101,1.21e-12,22;UBERON:0000079,1.21e-12,22;UBERON:0000991,9.69e-09,21;UBERON:0009196,9.69e-09,21;UBERON:0009117,9.69e-09,21;UBERON:0005564,9.69e-09,21;UBERON:0004176,2.37e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0,1.20848795132744,1.52054421143703,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.298897361103602,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0.272746120590835,0,0.731842236777572,0,1.51052125730374,0.310983165046111,1.00928340350251,1.45990943630332,0,0,0,0,0,0.354920400119532,0.674338760312407,0.964044119533928,1.65440959098591,0.217879444092406,0.949082476444386,1.21348177344148,0,0.38474715694639,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,2.05461064305758,0,0.552485933615378,0.229628896329213,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.661139661443912,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626719583092093,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0.948768663620925,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,1.05226393590145,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.219267951258557,0.821154570532092,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62636019627567,1.78801267576404,5.40072439437941,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,2.372145850727,0,0.655257829152084,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0.354581522651905,0,0.078493092850514,0,0.280272163313789,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0.118920090777569,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.327796715891087,0,4.69148616813116,1.06886962106224,1.74600309116205,2.005660314339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0,1.20848795132744,1.52054421143703,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.298897361103602,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0.272746120590835,0,0.731842236777572,0,1.51052125730374,0.310983165046111,1.00928340350251,1.45990943630332,0,0,0,0,0,0.354920400119532,0.674338760312407,0.964044119533928,1.65440959098591,0.217879444092406,0.949082476444386,1.21348177344148,0,0.38474715694639,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,2.05461064305758,0,0.552485933615378,0.229628896329213,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.661139661443912,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626719583092093,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0.948768663620925,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,1.05226393590145,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.219267951258557,0.821154570532092,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62636019627567,1.78801267576404,5.40072439437941,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,2.372145850727,0,0.655257829152084,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0.354581522651905,0,0.078493092850514,0,0.280272163313789,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0.118920090777569,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.327796715891087,0,4.69148616813116,1.06886962106224,1.74600309116205,2.005660314339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p3@GAL | |short_description=p3@GAL | ||
}} | }} |
Latest revision as of 20:27, 19 September 2015
Short description: | p3@GAL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GAL_5end |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | 461bp_to_AF077047_5end |
EntrezGene: | GAL |
HGNC: | 4114 |
UniProt: | Q9Y2S1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.05e-25 | 7 |
germ cell | 1.05e-25 | 7 |
neuron | 1.09e-17 | 6 |
neuroblast | 1.09e-17 | 6 |
electrically signaling cell | 1.09e-17 | 6 |
capillary endothelial cell | 1.42e-15 | 3 |
neuronal stem cell | 2.03e-13 | 8 |
embryonic stem cell | 1.21e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 1.55e-22 | 8 |
male reproductive organ | 1.77e-16 | 11 |
microcirculatory vessel | 1.42e-15 | 3 |
endothelium of capillary | 1.42e-15 | 3 |
capillary | 1.42e-15 | 3 |
male organism | 1.21e-12 | 22 |
male reproductive system | 1.21e-12 | 22 |
gonad | 9.69e-09 | 21 |
indifferent external genitalia | 9.69e-09 | 21 |
indifferent gonad | 9.69e-09 | 21 |
gonad primordium | 9.69e-09 | 21 |
external genitalia | 2.37e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.18e-12 | 22 |
germ cell cancer | 1.18e-12 | 22 |