FFCP PHASE1:Hg19::chr5:118668955..118668964,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25816 | |EntrezGene=25816 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17260 | |HGNC=17260 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z713 | |UniProt=B7Z713 | ||
|association_with_transcript=85bp_to_ENST00000513374,uc011cwf.1_5end | |association_with_transcript=85bp_to_ENST00000513374,uc011cwf.1_5end | ||
|cluster_id=chr5:118668955..118668964,+ | |||
|description=CAGE_peak_19_at_TNFAIP8_5end | |description=CAGE_peak_19_at_TNFAIP8_5end | ||
|id=chr5:118668955..118668964,+ | |id=chr5:118668955..118668964,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.50e-29!52;CL:0000542!8.09e-29!53;CL:0000051!8.09e-29!53;CL:0000945!6.34e-26!24;CL:0000826!6.34e-26!24;CL:0000236!3.07e-12!14;CL:0000791!7.11e-10!18;CL:0000789!7.11e-10!18;CL:0002420!7.11e-10!18;CL:0002419!7.11e-10!18;CL:0000790!7.11e-10!18;CL:0000084!1.88e-09!25;CL:0000827!1.88e-09!25;CL:0002087!8.22e-09!119;CL:0000738!2.52e-08!140;CL:0002031!1.89e-07!124;CL:0002621!5.42e-07!3;CL:0000898!6.14e-07!3 | |ontology_enrichment_celltype=CL:0000838!1.50e-29!52;CL:0000542!8.09e-29!53;CL:0000051!8.09e-29!53;CL:0000945!6.34e-26!24;CL:0000826!6.34e-26!24;CL:0000236!3.07e-12!14;CL:0000791!7.11e-10!18;CL:0000789!7.11e-10!18;CL:0002420!7.11e-10!18;CL:0002419!7.11e-10!18;CL:0000790!7.11e-10!18;CL:0000084!1.88e-09!25;CL:0000827!1.88e-09!25;CL:0002087!8.22e-09!119;CL:0000738!2.52e-08!140;CL:0002031!1.89e-07!124;CL:0002621!5.42e-07!3;CL:0000898!6.14e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.18e-35;13!CL:0000945;7.53e-31;24!CL:0000542;1.53e-15;53!CL:0000895;8.20e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,9.51e-33,14;CL:0000945,7.58e-31,24;CL:0000826,7.58e-31,24;CL:0000838,2.37e-20,52;CL:0000542,6.17e-20,53;CL:0000051,6.17e-20,53;CL:0000810,1.21e-10,1;CL:0000895,1.21e-10,1;CL:0002436,1.21e-10,1;CL:0002427,1.21e-10,1;CL:0002428,1.21e-10,1;CL:0002429,1.21e-10,1;CL:0002433,1.21e-10,1;CL:0002431,1.21e-10,1;CL:0002432,1.21e-10,1;CL:0002087,3.37e-08,115;CL:0002031,8.64e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000051;1.53e-15;53!CL:0002427;8.20e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;8.20e-11;1!DOID:0050177;8.20e-11;1!DOID:0050427;8.20e-11;1!DOID:2355;8.20e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,6.14e-11,1;DOID:0050177,6.14e-11,1;DOID:0050427,6.14e-11,1;DOID:2355,1.61e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000974!6.93e-16!10;UBERON:0002370!1.96e-08!4;UBERON:0005058!1.96e-08!4;UBERON:0009113!1.96e-08!4;UBERON:0003295!1.96e-08!4;UBERON:0005562!1.96e-08!4;UBERON:0003729!8.07e-08!5;UBERON:0004177!4.20e-07!7;UBERON:0001949!5.42e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.05e-10;4!UBERON:0004785;2.05e-10;4!UBERON:0000974;3.15e-07;6!UBERON:0003729;4.23e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.27e-10,4;UBERON:0004785,1.27e-10,4;UBERON:0000974,3.71e-09,10;UBERON:0003729,4.06e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.57470412614962,0.236132343941038,0.786728553697808,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,2.18455444504853,1.77901850772711,1.28019066769952,1.20118796110804,1.14950487990897,0.661044872784862,2.86216126360609,0,0,0,0,0,0,0.196709770113833,0,0,0.501559486172034,0.32592226663359,0.473447805734733,1.94826728407911,0.779873198196215,0.294605907474837,0.664601683750863,0,0.25618263945135,0.390178042679635,0.822189523018381,1.10540007114339,2.02862160014537,0.593146252648242,0.535081656179426,0,1.69964014046349,1.14966148080576,0,0.506039384039006,0.637130828648193,0,0.950452044448374,0.451725357233318,0.383959833463255,0,1.18388626022008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,1.09098448236334,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.708875486211932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.826424576804891,0,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,0,0,0.918893600827838,0,0,0.569647187174163,0.952927101831156,0.822724546172388,1.29694662238543,0,0,0,0,0.245040215981032,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984678443688556,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,3.06732237412927,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1007533168552,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,1.38328142328561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.39997479170986,0,0.516644938982447,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96295437002051,0.707818340086442,1.46742878817343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0.129177819672012,0.124149428591716,0,0.0636471582781649,0,0,0,0.336760265072938,0.860666464712116,0,0,0,0,0,0,0,0,0,0.201273793591026,1.60284246151616 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| ||
|short_description=p19@TNFAIP8 | |short_description=p19@TNFAIP8 | ||
}} | }} |
Latest revision as of 21:38, 19 September 2015
Short description: | p19@TNFAIP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_TNFAIP8_5end |
Coexpression cluster: | NA |
Association with transcript: | 85bp_to_ENST00000513374, uc011cwf.1_5end |
EntrezGene: | TNFAIP8 |
HGNC: | 17260 |
UniProt: | B7Z713 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 9.51e-33 | 14 |
lymphocyte of B lineage | 7.58e-31 | 24 |
pro-B cell | 7.58e-31 | 24 |
lymphoid lineage restricted progenitor cell | 2.37e-20 | 52 |
lymphocyte | 6.17e-20 | 53 |
common lymphoid progenitor | 6.17e-20 | 53 |
CD4-positive, alpha-beta thymocyte | 1.21e-10 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.21e-10 | 1 |
mature CD4 single-positive thymocyte | 1.21e-10 | 1 |
resting double-positive thymocyte | 1.21e-10 | 1 |
double-positive blast | 1.21e-10 | 1 |
CD69-positive double-positive thymocyte | 1.21e-10 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.21e-10 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.21e-10 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.21e-10 | 1 |
nongranular leukocyte | 3.37e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 8.64e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.27e-10 | 4 |
respiratory system mucosa | 1.27e-10 | 4 |
neck | 3.71e-09 | 10 |
mouth mucosa | 4.06e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.14e-11 | 1 |
monogenic disease | 6.14e-11 | 1 |
xeroderma pigmentosum | 6.14e-11 | 1 |
anemia | 1.61e-10 | 1 |