FFCP PHASE1:Hg19::chr9:104145856..104145868,-: Difference between revisions
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|id=chr9:104145856..104145868,-
|short_description=p3@BAAT
|description=CAGE_peak_3_at_BAAT_5end
|association_with_transcript=-55bp_to_ENST00000259407,NM_001127610,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=570 | |EntrezGene=570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=932 | |HGNC=932 | ||
|TSSclassifier=strong | |||
|UniProt=Q14032 | |UniProt=Q14032 | ||
|association_with_transcript=-55bp_to_ENST00000259407,NM_001127610,uc010mtd.2_5end | |||
|cluster_id=chr9:104145856..104145868,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_BAAT_5end | |||
|id=chr9:104145856..104145868,- | |||
|ontology_enrichment_celltype=CL:0000181!1.19e-29!12;CL:0000417!1.19e-29!12;CL:0000668!1.19e-29!12;CL:0000414!1.19e-29!12;CL:0000412!1.19e-29!12;CL:0000182!1.19e-29!12;CL:0000223!7.08e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.63e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.72e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.34e-24;11!UBERON:0009497;6.96e-21;13!UBERON:0006242;4.44e-18;1!UBERON:0001041;3.55e-09;30!UBERON:0003104;1.63e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;1.86e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.27e-41!19;UBERON:0006925!1.27e-41!19;UBERON:0008836!1.27e-41!19;UBERON:0009497!7.83e-39!25;UBERON:0000015!7.83e-39!25;UBERON:0002423!7.83e-39!25;UBERON:0006235!7.83e-39!25;UBERON:0004161!7.83e-39!25;UBERON:0007499!1.22e-38!25;UBERON:0009856!4.17e-37!26;UBERON:0005057!5.06e-37!26;UBERON:0008835!8.33e-36!22;UBERON:0003894!8.33e-36!22;UBERON:0009854!3.34e-34!23;UBERON:0002365!4.26e-25!31;UBERON:0002330!4.26e-25!31;UBERON:0002368!4.22e-22!35;UBERON:0003929!6.63e-21!54;UBERON:0005172!1.91e-20!55;UBERON:0005173!1.91e-20!55;UBERON:0005911!1.12e-18!82;UBERON:0002417!2.81e-18!61;UBERON:0000916!2.81e-18!61;UBERON:0000949!6.18e-17!45;UBERON:0005177!8.11e-14!107;UBERON:0009569!5.62e-13!113;UBERON:0001041!7.31e-13!98;UBERON:0002530!1.23e-12!59;UBERON:0000466!1.99e-11!126;UBERON:0000077!5.16e-11!130;UBERON:0004921!5.68e-11!129;UBERON:0004185!5.68e-11!129;UBERON:0001007!2.12e-10!155;UBERON:0001555!2.12e-10!155;UBERON:0007026!2.12e-10!155;UBERON:0004119!2.33e-09!169;UBERON:0000925!2.33e-09!169;UBERON:0006595!2.33e-09!169;UBERON:0003914!1.13e-08!118;UBERON:0000490!1.23e-08!138;UBERON:0001048!4.68e-08!168;UBERON:0002405!3.29e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.80e-32;25!UBERON:0002107;2.14e-31;19!UBERON:0006925;2.14e-31;19!UBERON:0002365;2.80e-19;31!UBERON:0002330;2.80e-19;31!UBERON:0002368;1.86e-16;33!UBERON:0005172;1.58e-10;52!UBERON:0005173;1.58e-10;52!UBERON:0000949;1.06e-09;43!UBERON:0002417;5.49e-07;58!UBERON:0000916;5.49e-07;58!UBERON:0002110;6.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,2.94e-32,25;UBERON:0000015,2.94e-32,25;UBERON:0002423,2.94e-32,25;UBERON:0006235,2.94e-32,25;UBERON:0004161,2.94e-32,25;UBERON:0002107,2.26e-31,19;UBERON:0006925,2.26e-31,19;UBERON:0008836,2.26e-31,19;UBERON:0008835,4.29e-27,22;UBERON:0003894,4.29e-27,22;UBERON:0009854,6.48e-26,23;UBERON:0007499,7.73e-24,25;UBERON:0009856,6.41e-23,26;UBERON:0002365,3.28e-19,31;UBERON:0002330,3.28e-19,31;UBERON:0002368,5.29e-17,35;UBERON:0003929,8.79e-15,54;UBERON:0005172,8.79e-15,54;UBERON:0005173,8.79e-15,54;UBERON:0002417,2.88e-13,60;UBERON:0000916,2.88e-13,60;UBERON:0000949,3.42e-13,45;UBERON:0005911,1.89e-12,82;UBERON:0002530,5.14e-10,59;UBERON:0005177,5.35e-10,101;UBERON:0001041,5.49e-09,87;UBERON:0009569,5.92e-09,112;UBERON:0002110,6.88e-07,3;UBERON:0006242,6.88e-07,3 | |||
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|short_description=p3@BAAT | |||
}} | }} |
Latest revision as of 21:40, 19 September 2015
Short description: | p3@BAAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BAAT_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -55bp_to_ENST00000259407, NM_001127610, uc010mtd.2_5end |
EntrezGene: | BAAT |
HGNC: | 932 |
UniProt: | Q14032 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.72e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 2.94e-32 | 25 |
anatomical boundary | 2.94e-32 | 25 |
hepatobiliary system | 2.94e-32 | 25 |
foregut-midgut junction | 2.94e-32 | 25 |
septum transversum | 2.94e-32 | 25 |
liver | 2.26e-31 | 19 |
digestive gland | 2.26e-31 | 19 |
liver bud | 2.26e-31 | 19 |
hepatic diverticulum | 4.29e-27 | 22 |
liver primordium | 4.29e-27 | 22 |
digestive tract diverticulum | 6.48e-26 | 23 |
epithelial sac | 7.73e-24 | 25 |
sac | 6.41e-23 | 26 |
exocrine gland | 3.28e-19 | 31 |
exocrine system | 3.28e-19 | 31 |
endocrine gland | 5.29e-17 | 35 |
gut epithelium | 8.79e-15 | 54 |
abdomen element | 8.79e-15 | 54 |
abdominal segment element | 8.79e-15 | 54 |
abdominal segment of trunk | 2.88e-13 | 60 |
abdomen | 2.88e-13 | 60 |
endocrine system | 3.42e-13 | 45 |
endo-epithelium | 1.89e-12 | 82 |
gland | 5.14e-10 | 59 |
trunk region element | 5.35e-10 | 101 |
foregut | 5.49e-09 | 87 |
subdivision of trunk | 5.92e-09 | 112 |
gallbladder | 6.88e-07 | 3 |
gall bladder primordium | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.02e-09 | 2 |