FFCP PHASE1:Hg19::chr5:118669265..118669294,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:118669265..118669294,+ to FFCP PHASE1:Hg19::chr5:118669265..118669294,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25816 | |EntrezGene=25816 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17260 | |HGNC=17260 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=395bp_to_uc011cwf.1_5end | |||
|cluster_id=chr5:118669265..118669294,+ | |||
|description=CAGE_peak_10_at_TNFAIP8_5end | |||
|id=chr5:118669265..118669294,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.55e-30!53;CL:0000051!1.55e-30!53;CL:0000838!4.97e-30!52;CL:0000791!5.58e-18!18;CL:0000789!5.58e-18!18;CL:0002420!5.58e-18!18;CL:0002419!5.58e-18!18;CL:0000790!5.58e-18!18;CL:0000084!3.22e-17!25;CL:0000827!3.22e-17!25;CL:0000738!1.03e-16!140;CL:0002087!5.52e-16!119;CL:0002031!5.07e-13!124;CL:0000945!3.33e-11!24;CL:0000826!3.33e-11!24;CL:0000037!3.70e-10!172;CL:0000566!3.70e-10!172;CL:0000625!6.56e-10!11;CL:0002032!1.83e-09!165;CL:0000837!1.83e-09!165;CL:0000988!4.43e-09!182;CL:0000624!8.65e-09!6;CL:0002076!3.89e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.10e-24;18!CL:0000789;7.10e-24;18!CL:0002419;7.10e-24;18!CL:0000084;1.14e-20;25!CL:0000624;7.64e-14;6!CL:0000542;1.14e-12;53!CL:0000625;7.90e-11;11!CL:0002076;3.29e-09;42!CL:0002159;1.28e-08;14!CL:0002621;5.59e-08;3!CL:0002166;7.46e-08;3!CL:0000898;2.33e-07;3!CL:0000623;2.88e-07;3!CL:0002368;3.47e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.98e-24,18;CL:0000789,5.98e-24,18;CL:0002420,5.98e-24,18;CL:0002419,5.98e-24,18;CL:0000790,5.98e-24,18;CL:0000838,1.53e-23,52;CL:0000542,6.11e-23,53;CL:0000051,6.11e-23,53;CL:0000084,1.11e-20,25;CL:0000827,1.11e-20,25;CL:0000624,7.33e-14,6;CL:0000625,6.65e-11,11;CL:0002087,6.95e-11,115;CL:0002076,2.98e-10,42;CL:0000738,1.99e-09,136;CL:0002031,1.62e-08,120;CL:0002159,1.70e-08,14;CL:0002621,5.50e-08,3;CL:0002166,7.18e-08,3;CL:0000898,2.22e-07,3;CL:0002368,3.03e-07,13;CL:0000623,4.27e-07,3;CL:0000825,4.27e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;7.10e-24;18!CL:0000051;1.14e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.79e-12!72;UBERON:0001557!3.66e-11!19;UBERON:0000065!4.02e-10!53;UBERON:0001737!2.83e-09!9;UBERON:0000974!4.68e-09!10;UBERON:0000072!6.77e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.36e-09;9!UBERON:0001557;2.36e-09;9!UBERON:0001949;5.59e-08;3!UBERON:0000065;1.50e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.29e-11,74;UBERON:0001737,2.90e-09,9;UBERON:0000065,1.33e-08,54;UBERON:0001949,5.50e-08,3 | |||
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| ||
|short_description=p10@TNFAIP8 | |||
}} | }} |
Latest revision as of 21:41, 19 September 2015
Short description: | p10@TNFAIP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TNFAIP8_5end |
Coexpression cluster: | NA |
Association with transcript: | 395bp_to_uc011cwf.1_5end |
EntrezGene: | TNFAIP8 |
HGNC: | 17260 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.98e-24 | 18 |
alpha-beta T cell | 5.98e-24 | 18 |
immature T cell | 5.98e-24 | 18 |
mature T cell | 5.98e-24 | 18 |
immature alpha-beta T cell | 5.98e-24 | 18 |
lymphoid lineage restricted progenitor cell | 1.53e-23 | 52 |
lymphocyte | 6.11e-23 | 53 |
common lymphoid progenitor | 6.11e-23 | 53 |
T cell | 1.11e-20 | 25 |
pro-T cell | 1.11e-20 | 25 |
CD4-positive, alpha-beta T cell | 7.33e-14 | 6 |
CD8-positive, alpha-beta T cell | 6.65e-11 | 11 |
nongranular leukocyte | 6.95e-11 | 115 |
endo-epithelial cell | 2.98e-10 | 42 |
leukocyte | 1.99e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 1.62e-08 | 120 |
general ecto-epithelial cell | 1.70e-08 | 14 |
gingival epithelial cell | 5.50e-08 | 3 |
epithelial cell of Malassez | 7.18e-08 | 3 |
naive T cell | 2.22e-07 | 3 |
respiratory epithelial cell | 3.03e-07 | 13 |
natural killer cell | 4.27e-07 | 3 |
pro-NK cell | 4.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.29e-11 | 74 |
larynx | 2.90e-09 | 9 |
respiratory tract | 1.33e-08 | 54 |
gingival epithelium | 5.50e-08 | 3 |