FFCP PHASE1:Hg19::chr3:120114861..120114881,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=406975 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31570 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-285bp_to_NR_029584_5end | |||
|cluster_id=chr3:120114861..120114881,- | |||
|coexpression_cluster_id=C605 | |||
|description=CAGE_peak_2_at_MIR198_5end | |||
|id=chr3:120114861..120114881,- | |||
|ontology_enrichment_celltype=CL:0000055!9.03e-24!180;CL:0000057!2.59e-17!75;CL:0000222!5.73e-10!119;CL:0000499!1.79e-08!27;CL:0002334!1.91e-08!12;CL:0002620!3.54e-07!23;CL:0000680!6.64e-07!57;CL:0000056!6.64e-07!57;CL:0000355!6.64e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002334;8.03e-11;12!CL:0002620;1.85e-09;23!CL:0000499;2.18e-09;28!CL:0000057;2.69e-08;73!CL:0000134;2.83e-08;55!CL:0002320;1.05e-07;188!CL:0000723;2.07e-07;61!CL:0000048;4.16e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.00e-22,76;CL:0002334,7.44e-11,12;CL:0000048,7.39e-10,427;CL:0002620,9.85e-10,23;CL:0000499,1.05e-09,28;CL:0000723,2.91e-09,433;CL:0002320,9.91e-09,361;CL:0000034,1.66e-08,441;CL:0000134,1.48e-07,354;CL:0000136,6.57e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.40e-08!143;UBERON:0000914!3.63e-08!83;UBERON:0002329!3.63e-08!83;UBERON:0003077!3.63e-08!83;UBERON:0003059!3.63e-08!83;UBERON:0007282!3.63e-08!83;UBERON:0009618!3.63e-08!83;UBERON:0007285!3.63e-08!83;UBERON:0002385!4.19e-07!63;UBERON:0001015!4.19e-07!63;UBERON:0000383!4.19e-07!63;UBERON:0002100!4.53e-07!216;UBERON:0001134!5.86e-07!61;UBERON:0002036!5.86e-07!61;UBERON:0003082!5.86e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.06e-08;9!UBERON:0000042;1.06e-08;9!UBERON:0002384;3.40e-08;198!UBERON:0003688;8.90e-08;6!UBERON:0002358;8.90e-08;6!UBERON:0003684;8.90e-08;6!UBERON:0001178;8.90e-08;6!UBERON:0002199;1.74e-07;46!UBERON:0002416;1.74e-07;46!UBERON:0001013;3.23e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,5.72e-11,46;UBERON:0002416,5.72e-11,46;UBERON:0002384,7.32e-09,371;UBERON:0002097,5.74e-08,41;UBERON:0003688,1.09e-07,6;UBERON:0002358,1.09e-07,6;UBERON:0003684,1.09e-07,6;UBERON:0001178,1.09e-07,6;UBERON:0003102,1.22e-07,99;UBERON:0001013,2.35e-07,14 | |||
|phase1_expression=0.908391896352783,24.6215602474631,3.10099689011137,7.00513088471913,13.4088328328186,10.4680622892044,5.06599756336621,1.26343974685366,2.87304191019822,0,0,0.436882744260345,0.263766978228454,1.48519623552056,4.63956326019082,3.36162573225888,1.80808358407193,0.730310090387373,2.92759679274304,0,0.612002073732759,0.313454721478088,1.14494394852423,0.821246550437305,1.38096903554283,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,5.78302643815306,4.01070328508712,11.8774145547875,3.9764297352555,2.91980922181582,0.472674085820339,1.33037638477538,1.22968699970376,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,1.67799774483962,2.47606237746061,0.835979866147242,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0.488124115096339,0,1.62028389576352,0.267899184852239,0.22452937262617,0.112611480483322,0,0,1.28241220751285,0,0,0,3.97577561356255,2.40597972162702,0.662045904066094,7.17091551872034,3.54668382198357,1.68203280042692,1.06748995729705,3.20667812942308,0,0.808264032418128,0.653847612453835,0.151357427644931,1.72852777344,0,0,0,1.19558944441441,0.704606991862589,0.161872944368132,1.26405726032024,0.61246251376468,1.35117749042945,1.13658359293342,2.37600571456411,7.17074094907815,0,0,0.336672227908132,0.625592599359821,0,1.31693286264251,7.35570709917647,1.95309476578576,1.36118619792025,4.66413052791041,4.69826255400848,1.90738711043606,3.30100205692843,1.64884046781502,3.60696756063881,1.67505170698431,2.53164498361899,3.70260619612555,2.01947019395292,1.56484827691909,1.61646056818812,2.84007674013291,2.92181084860157,1.69560592310488,0.193260853163297,0,0,0.609868530647977,0,0.348581828608555,0.10366105501537,0.252320850875628,0.72995471815166,0,3.21620469096443,0,1.39310378409594,4.33127689001751,0.236613600079688,0.337169380156203,0.482022059766964,1.10293972732394,0.217879444092406,0.474541238222193,0.134831308160164,0,0.769494313892781,1.4763109092493,0,0.4115740113314,4.41026134156626,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0.402115889646523,0.185176890317059,0,0,0,0.115930404975077,0.70445216541493,0.144366447761074,0.462985512576611,0.951270761172991,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.411309970813294,0.300343057843917,0.571652865261156,0,0.87192013766656,0.4400297149257,0.904902010304444,0,3.381211010224,1.32969058292435,3.12022310734098,0,0,0,2.00169191121407,1.08524321078289,0,0.325736184293735,3.55391948742546,0,3.01439377059586,0,4.69873058555668,0,0,0,3.11512312139057,5.7430967917057,0,2.02693829334611,3.49309748335652,0.179060963239896,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,1.59498939234882,1.50051156317903,2.71265023699736,6.65506756898583,26.4074903419799,4.73107245101804,1.99140405487612,1.20378439891088,0,4.1389228517002,2.65690239414175,0.184369168541703,0.868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,0,2.72151263996712,5.45837177201309,1.68808170616869,19.3655465158821,3.97231362692673,3.07024349440022,7.72098821489316,7.42090332224955,4.1636617326717,3.01854933032316,0.574890092096664,3.63478100428535,3.25389059687886,0,0.40101294060657,0.0920809889358963,1.7222167224691,2.73136752010076,4.45823010862042,0,0.462092022626489,0,0,1.05551628892876,1.13733384070897,0.340187410553031,0.431831832204279,1.54227252690289,0.270946437543853,0,0.254876273045038,0.831076008928724,0.671624264166535,0,0,0.256450125116389,0,0,0.721287081534056,0.183138929636687,0.082509499920588,0,2.60024098414608,1.6068392984416,0.48335359146061,1.69453478826109,0.921022048356777,0.827019434907183,1.18162269355101,3.33538396002726,1.19317278382541,0.445160178233687,0.330569830721956,0,0,0.30347334256665,0,4.7221852024596,0.6970372701606,0.308033580176089,0,0,0.9266210955196,1.71749864090389,1.48863347743867,0.949138274156178,1.90630193923825,0.255897791311334,0.855877976067841,0.318203247925937,0.78494864019923,0.899362287916574,3.56898138656871,0.824686816419805,0.202182481573316,0,1.26377536871694,0,3.89941583410055,1.05650146756755,0.272999822815972,3.39373036688911,2.26016233240486,0.551365343546124,0,0.438450885253763,0,1.31178950409327,0,1.54911749049875,0.281695602532241,0.573645408816206,1.3754865741837,0.7133421029625,0,9.49984358839489,13.501090611356,0,0.699869440489966,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0.79312517629427,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,2.07875276582847,2.45728561679386,0,0.140669416410513,0.111308705022906,0,0,1.19548792950642,0.276283915531148,0,0,0,3.42143546427988,0.179736702294654,0,0,0.690503839458535,2.3948309234694,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0.291604613383254,0.173624994933292,0,0,0,0,0.295547618953547,0,0,0,0.615602068030377,0.683652335082007,0.69169171316418,0,0.54323685961004,6.38002319463839,0.915975934018623,2.66517388009317,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,4.01288823649394,0,0,0,0.242780379534093,0.789168805698781,1.20990716048664,0,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0.138674673013139,3.81831424337288,0,0,1.92199335066233,0.51595809741485,0.0967563312890851,0,0,0.581934098930517,0,2.25980740780532,0.137041924646751,0,0,0.195551382734803,0.240476460754601,0.426905989478705,1.9980960958213,0,0,0,0,0.124252535565433,0,0.543616824294456,0.313808538937,0.407992870545287,0,0,0,0,3.43812353135966,0,1.67569440763353,0,0,1.19807400299395,2.14613024068285,0,0.470284307407084,2.88239906833923,0,0,0,0,0,0,0,0.136203406111576,0.643012593860077,0.962776056180637,2.9080823662043,0,0,0.0607495566580247,0,0.157611414598396,0.209818352539992,0,0.537862017998534,0,1.42939065274673,0,0,1.08599920350743,3.45688596480507,3.26587360109409,0,0,1.87426823963964,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,0,1.08803560673895,0.2506898940227,0,0.655745261419609,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0,0,0.124980407962107,0,0,1.41159491818903,0,0,1.49254802886874,2.57084640831947,3.32883516901568,0.757612021100357,3.52195062453605,7.11848977277229,0.686520205190771,1.81477108515887,3.26418121223839,1.33069634990671,1.11507737014592,0.899606224327209,1.39736661188633,1.24411862352257,2.65841714557995,0.521745061811734,2.40412174395549,1.14241563650639,0,1.81848659202559,1.28892668450986,1.39210127963548,1.99047944349308,6.80047199927361,1.71697852591396,1.6837474438296,0,0,1.92997432237433,0.260994291965212,0.453411851024545,1.62065732026684,2.20263034055821,0.537266523244462,3.39681591877069,1.09642024789354,2.12026975135057,0.38582807654183,1.35153952522458,0,1.38172136692479,1.82315973706429,0,0,0,0,2.94848863961771,2.21195617878347,0,0,0,0,0,1.28874165176289,0,0,0,0,0.157265941855896,0,0,0,0.495743057036009,0,2.54403480522735,0.157723490002507,0,14.459713691318,11.3310826620684,0,0,0,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0.231051332300676,1.1441462864015,0,0,0.150420656698515,1.0085253435176,0,0,7.04219245293416,0,0,0,0,0,0,0,2.97726707033577,0.175871244359621,0.255524855279191,0,0,0.606965604236632,0,0.79832133146375,0,0,0,0,0,0.333694205676207,0.156986185701028,0,0,1.82631744101899,0.863710364874486,0.47775168788705,0,0,0.116241425368125,0.173858272302579,2.40513409419076,0,0.3414369541879,0,0,0,0.170426809518315,1.69354820076372,1.3746412112643,1.86123831398592,0,0,0,0,0,0,2.3196288626764,3.39997695141398,0,0,2.73516208788408,0,0,0,0.0771741581079447,1.09279780251979,0,0.980593287015622,0,0,0,0.8453114551668,1.35941691750254,0,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0.315543124386369,0,0,0,17.1117708356706,18.0248495166253,26.3902202895511,0.378499274505237,0,0.253397002022874,0.101988829741982,0,0,0,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0.952257725854961,0.0645889098360061,0.0620747142958579,0.33639558774184,0,0,0.435433495793923,2.39563310759697,0,0.143444410785353,1.66330178273007,0.0814032686109745,0.426909383510862,0,0.269475606319761,11.7320471201727,0.122241444182866,3.25516942652591,0,0.201273793591026,0 | |||
|short_description=p2@MIR198 | |||
}} |
Latest revision as of 21:49, 19 September 2015
Short description: | p2@MIR198 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MIR198_5end |
Coexpression cluster: | C605_hepatic_normal_osteoclastoma_tenocyte_neurofibroma_Ewing_mesothelioma |
Association with transcript: | -285bp_to_NR_029584_5end |
EntrezGene: | MIR198 |
HGNC: | 31570 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.00e-22 | 76 |
preadipocyte | 7.44e-11 | 12 |
multi fate stem cell | 7.39e-10 | 427 |
skin fibroblast | 9.85e-10 | 23 |
stromal cell | 1.05e-09 | 28 |
somatic stem cell | 2.91e-09 | 433 |
connective tissue cell | 9.91e-09 | 361 |
stem cell | 1.66e-08 | 441 |
mesenchymal cell | 1.48e-07 | 354 |
fat cell | 6.57e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
integument | 5.72e-11 | 46 |
integumental system | 5.72e-11 | 46 |
connective tissue | 7.32e-09 | 371 |
skin of body | 5.74e-08 | 41 |
omentum | 1.09e-07 | 6 |
peritoneum | 1.09e-07 | 6 |
abdominal cavity | 1.09e-07 | 6 |
visceral peritoneum | 1.09e-07 | 6 |
surface structure | 1.22e-07 | 99 |
adipose tissue | 2.35e-07 | 14 |