FFCP PHASE1:Hg19::chr2:21225401..21225413,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=227bp_to_M36676_5end | |association_with_transcript=227bp_to_M36676_5end | ||
|cluster_id=chr2:21225401..21225413,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_9_at_APOB_5end | |description=CAGE_peak_9_at_APOB_5end | ||
|id=chr2:21225401..21225413,- | |id=chr2:21225401..21225413,- | ||
|ontology_enrichment_celltype=CL:0000181!2.94e-37!12;CL:0000417!2.94e-37!12;CL:0000668!2.94e-37!12;CL:0000414!2.94e-37!12;CL:0000412!2.94e-37!12;CL:0000182!2.94e-37!12;CL:0000223!2.01e-11!59;CL:0002322!5.81e-08!5 | |ontology_enrichment_celltype=CL:0000181!2.94e-37!12;CL:0000417!2.94e-37!12;CL:0000668!2.94e-37!12;CL:0000414!2.94e-37!12;CL:0000412!2.94e-37!12;CL:0000182!2.94e-37!12;CL:0000223!2.01e-11!59;CL:0002322!5.81e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.01e-40;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.14e-40,12;CL:0000223,7.83e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.66e-30;11!UBERON:0009497;1.16e-25;13!UBERON:0001041;3.91e-11;30!UBERON:0003104;9.23e-11;31!CL:0000223;2.94e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;2.19e-44;19!UBERON:0006925;2.19e-44;19!UBERON:0002423;1.34e-33;25!UBERON:0002365;5.76e-26;31!UBERON:0002330;5.76e-26;31!UBERON:0002108;4.31e-24;4!UBERON:0002368;6.49e-23;33!UBERON:0000949;8.80e-17;43!UBERON:0000160;6.84e-12;17!UBERON:0001007;7.39e-12;81!UBERON:0005172;4.64e-10;52!UBERON:0005173;4.64e-10;52!UBERON:0005409;2.31e-09;22!UBERON:0002417;7.17e-09;58!UBERON:0000916;7.17e-09;58!UBERON:0002530;9.12e-09;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.07e-44,19;UBERON:0006925,2.07e-44,19;UBERON:0008836,2.07e-44,19;UBERON:0008835,2.79e-38,22;UBERON:0003894,2.79e-38,22;UBERON:0009854,1.36e-36,23;UBERON:0007499,1.28e-33,25;UBERON:0009497,1.28e-33,25;UBERON:0000015,1.28e-33,25;UBERON:0002423,1.28e-33,25;UBERON:0006235,1.28e-33,25;UBERON:0004161,1.28e-33,25;UBERON:0009856,2.65e-32,26;UBERON:0002365,5.39e-27,31;UBERON:0002330,5.39e-27,31;UBERON:0002108,4.67e-24,4;UBERON:0002368,7.76e-24,35;UBERON:0003929,3.55e-19,54;UBERON:0000949,2.17e-18,45;UBERON:0005172,3.32e-15,54;UBERON:0005173,3.32e-15,54;UBERON:0004921,9.40e-15,118;UBERON:0002530,7.46e-14,59;UBERON:0002417,1.31e-13,60;UBERON:0000916,1.31e-13,60;UBERON:0005911,2.61e-12,82;UBERON:0000160,6.65e-12,17;UBERON:0001007,9.17e-12,145;UBERON:0001555,9.17e-12,145;UBERON:0007026,9.17e-12,145;UBERON:0004119,1.56e-10,160;UBERON:0000925,1.56e-10,160;UBERON:0006595,1.56e-10,160;UBERON:0001041,3.84e-09,87;UBERON:0011216,2.05e-08,223;UBERON:0005409,2.57e-08,25;UBERON:0005177,9.25e-08,101;UBERON:0009569,6.47e-07,112 | |||
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|short_description=p9@APOB | |short_description=p9@APOB | ||
}} | }} |
Latest revision as of 22:51, 19 September 2015
Short description: | p9@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 227bp_to_M36676_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.14e-40 | 12 |
endodermal cell | 7.83e-11 | 58 |