FFCP PHASE1:Hg19::chr12:66220713..66220724,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=204010 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=35752 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=29bp_to_ENST00000489520,NR_026825,uc001sso.2_5end | |||
|cluster_id=chr12:66220713..66220724,- | |||
|description=CAGE_peak_2_at_RPSAP52_5end | |||
|id=chr12:66220713..66220724,- | |||
|ontology_enrichment_celltype=CL:0000055!1.62e-22!180;CL:0000057!1.92e-15!75;CL:0002620!3.81e-15!23;CL:0002371!7.88e-12!591;CL:0000680!2.05e-10!57;CL:0000056!2.05e-10!57;CL:0000355!2.05e-10!57;CL:0000548!5.65e-10!679;CL:0000004!5.65e-10!679;CL:0000255!5.65e-10!679;CL:0000012!1.03e-09!682;CL:0000144!4.06e-09!625;CL:0000220!7.75e-09!246;CL:0002321!1.33e-08!248;CL:0000187!1.81e-08!54;CL:0000183!7.51e-08!59;CL:0000192!1.08e-07!42;CL:0000514!1.08e-07!42;CL:0000393!1.91e-07!60;CL:0000211!1.91e-07!60;CL:0002556!5.62e-07!6;CL:0000723!9.65e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002551;6.76e-09;6!CL:0002556;1.88e-08;6!CL:0002582;5.81e-08;3!CL:0000515;5.81e-08;3!CL:0002620;6.56e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.41e-09,76;CL:0002551,6.11e-09,6;CL:0002556,2.32e-08,6;CL:0002582,3.19e-08,3;CL:0002620,1.00e-07,23;CL:0002574,6.80e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;3.12e-08;3!DOID:127;3.12e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.39e-08,3;DOID:127,2.39e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.69e-16!83;UBERON:0002329!4.69e-16!83;UBERON:0003077!4.69e-16!83;UBERON:0003059!4.69e-16!83;UBERON:0007282!4.69e-16!83;UBERON:0009618!4.69e-16!83;UBERON:0007285!4.69e-16!83;UBERON:0000486!6.20e-14!82;UBERON:0002199!1.54e-13!45;UBERON:0002416!1.54e-13!45;UBERON:0003102!2.02e-13!95;UBERON:0002097!2.89e-12!40;UBERON:0004290!8.89e-12!70;UBERON:0001637!2.53e-11!42;UBERON:0003509!2.53e-11!42;UBERON:0004572!2.53e-11!42;UBERON:0001134!8.63e-10!61;UBERON:0002036!8.63e-10!61;UBERON:0003082!8.63e-10!61;UBERON:0001981!3.21e-09!60;UBERON:0007500!3.21e-09!60;UBERON:0004537!3.21e-09!60;UBERON:0006965!3.21e-09!60;UBERON:0002385!3.47e-09!63;UBERON:0001015!3.47e-09!63;UBERON:0000383!3.47e-09!63;UBERON:0004573!3.95e-09!33;UBERON:0004571!3.95e-09!33;UBERON:0005256!8.46e-09!143;UBERON:0002049!2.81e-08!79;UBERON:0007798!2.81e-08!79;UBERON:0000055!4.33e-08!69;UBERON:0004872!5.16e-08!84;UBERON:0003129!1.79e-07!11;UBERON:0000490!2.85e-07!138;UBERON:0001758!5.62e-07!6;UBERON:0003672!5.62e-07!6;UBERON:0000119!8.86e-07!312;UBERON:0000483!9.11e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;1.88e-08;6!UBERON:0003672;1.88e-08;6!UBERON:0003129;2.63e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,2.32e-08,6;UBERON:0003672,2.32e-08,6;UBERON:0003129,3.15e-07,7;UBERON:0002329,4.01e-07,71;UBERON:0003059,4.01e-07,71;UBERON:0007282,4.01e-07,71;UBERON:0004290,4.01e-07,71;UBERON:0009618,4.01e-07,71;UBERON:0004573,4.09e-07,33;UBERON:0004571,4.09e-07,33;UBERON:0003077,5.37e-07,72;UBERON:0007285,5.37e-07,72;UBERON:0000486,5.41e-07,83;UBERON:0007524,7.14e-07,73 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0.984968464614303,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0.795285947051099,1.94653948121054,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0.267899184852239,0,0,0,1.89853131913626,0.183201743930407,0,0,0,0,0.886413581652058,1.19168262731897,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0,0.326923806226917,0,0,0,0.312160076830321,0,0.896692083310806,1.52664848236894,4.37056949793955,2.80901613404497,0.408308342509787,0.245668634623536,0,0,0,0,0,1.34668891163253,1.00094815897571,1.6623846929051,0.438977620880838,0.30648779579902,0.300476117813194,0.226864366320042,1.07633781413317,0.213557388818567,0.211931901159562,0.600182192168805,0.412210116953756,0.515281080091258,0.18611685633159,0.843881661206331,0.389748020644795,1.00973509697646,0.0920498986422993,0,1.06502877754984,0.302256294682921,0.67824236924195,1.54608682530637,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.703702806881416,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.850650583454319,0.179117045405697,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,3.381211010224,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,1.44781306667579,0.61642896765115,1.25342674267927,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0,0.585707074963566,0,0,0,0,0.184369168541703,1.91143951829782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07946785661859,0.710246901252508,1.56041596426237,0.519254429183621,1.85936605535935,0,0,0.184161977871793,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0.769350375349168,0,0,0,0,0,1.72279661398852,0.650060246036521,0,0.676695028044854,0,0.15350367472613,0.413509717453592,0.322260734604821,0,0.0852266274161009,0,0.495854746082934,0,1.02090169995667,0,1.39453664789186,0.31481234683064,1.3940745403212,0,0,0,1.11194531462352,0.286249773483982,0,0,0,0.255897791311334,0,4.77304871888905,0,0,0.274537029736055,0.235624804691373,0.202182481573316,0,0.842516912477962,0,0.243713489631284,0,0.409499734223957,0.141405431953713,0,2.75682671773062,1.99031692572366,0,0.578775534266688,0,0,0.6196469961995,0.563391205064483,0.143411352204052,0,0.35667105148125,0,0,0.658589785919804,0.75894634753143,0.349934720244983,0.48111056362756,0,0,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.222617410045812,0,0.422250816255987,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0.617792886840502,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0.288109595976299,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.720599767084807,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.383830394638891,0,0,0,2.71499800876856,0,1.63293680054705,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41159491818903,0,0,0.447764408660622,0,1.10961172300523,0.378806010550178,0.251567901752575,2.66943366478961,0,0.756154618816195,0.932623203496683,0.591420599958536,0.796483835818512,0.899606224327209,1.55262956876259,0.414706207840855,1.59505028734797,0,0,0,0,0.727394636810238,0,0.928067519756987,0.796191777397232,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920529751259204,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0.690359926060101,0,0,0.20170506870352,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11231401892069,0,0,0,0,0,0,0,0,0.23248285073625,0.173858272302579,0,0,0,0,0,0.473328002922261,0.596493833314104,0,0.22910686854405,0.93061915699296,0.955538938977433,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0.320965466756673,0,0,0,0.157771562193185,0,0,0,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0.448527450322454,0,0,0,0,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@RPSAP52 | |||
}} |
Latest revision as of 23:30, 19 September 2015
Short description: | p2@RPSAP52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPSAP52_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000489520, NR_026825, uc001sso.2_5end |
EntrezGene: | RPSAP52 |
HGNC: | 35752 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.41e-09 | 76 |
fibroblast of dermis | 6.11e-09 | 6 |
fibroblast of periodontium | 2.32e-08 | 6 |
visceral preadipocyte | 3.19e-08 | 3 |
skin fibroblast | 1.00e-07 | 23 |
stromal cell of pancreas | 6.80e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
periodontium | 2.32e-08 | 6 |
dentition | 2.32e-08 | 6 |
skull | 3.15e-07 | 7 |
somite | 4.01e-07 | 71 |
presomitic mesoderm | 4.01e-07 | 71 |
presumptive segmental plate | 4.01e-07 | 71 |
dermomyotome | 4.01e-07 | 71 |
trunk paraxial mesoderm | 4.01e-07 | 71 |
systemic artery | 4.09e-07 | 33 |
systemic arterial system | 4.09e-07 | 33 |
paraxial mesoderm | 5.37e-07 | 72 |
presumptive paraxial mesoderm | 5.37e-07 | 72 |
multilaminar epithelium | 5.41e-07 | 83 |
dense mesenchyme tissue | 7.14e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.39e-08 | 3 |
leiomyoma | 2.39e-08 | 3 |