FFCP PHASE1:Hg19::chr15:93485657..93485659,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:93485657..93485659,+
|short_description=p16@CHD2
|description=CAGE_peak_16_at_CHD2_5end
|association_with_transcript=-413bp_to_uc010bof.1_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1106 | |EntrezGene=1106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1917 | |HGNC=1917 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-413bp_to_uc010bof.1_5end | |||
|cluster_id=chr15:93485657..93485659,+ | |||
|description=CAGE_peak_16_at_CHD2_5end | |||
|id=chr15:93485657..93485659,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.03e-15!140;CL:0000037!9.68e-14!172;CL:0000566!9.68e-14!172;CL:0002032!2.39e-13!165;CL:0000837!2.39e-13!165;CL:0002087!4.15e-13!119;CL:0002031!1.20e-12!124;CL:0000988!3.89e-12!182;CL:0002057!3.35e-11!42;CL:0000860!3.18e-10!45;CL:0000766!1.25e-09!76;CL:0000763!1.45e-08!112;CL:0000049!1.45e-08!112;CL:0000839!4.71e-08!70;CL:0000557!7.85e-08!71;CL:0002009!1.05e-07!65;CL:0002194!1.26e-07!63;CL:0000576!1.26e-07!63;CL:0000040!1.26e-07!63;CL:0000559!1.26e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.69e-13;33!CL:0002057;2.69e-13;33!CL:0000473;8.81e-10;39!CL:0000234;8.81e-10;39!CL:0000576;9.55e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.28e-18,136;CL:0000860,3.65e-16,42;CL:0002057,3.65e-16,42;CL:0002031,1.65e-14,120;CL:0002087,2.74e-14,115;CL:0000766,5.36e-14,72;CL:0000037,5.50e-14,168;CL:0002032,7.75e-14,161;CL:0000837,7.75e-14,161;CL:0000473,1.30e-13,48;CL:0000234,1.30e-13,48;CL:0000988,8.01e-13,177;CL:0002009,4.52e-11,61;CL:0000557,6.48e-11,67;CL:0002194,4.56e-10,59;CL:0000576,4.56e-10,59;CL:0000040,4.56e-10,59;CL:0000559,4.56e-10,59;CL:0000839,9.86e-10,66;CL:0000763,1.21e-09,108;CL:0000049,1.21e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.99e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;9.45e-07;2 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.38e-07!102;UBERON:0003061!7.38e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;2.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.37e-09,82;UBERON:0002371,4.13e-09,76;UBERON:0002390,6.38e-09,98;UBERON:0003061,6.38e-09,98;UBERON:0004765,5.54e-08,90;UBERON:0002193,1.23e-07,108;UBERON:0002133,4.95e-07,2;UBERON:0001434,9.48e-07,100 | |||
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| ||
|short_description=p16@CHD2 | |||
}} | }} |
Latest revision as of 23:33, 19 September 2015
Short description: | p16@CHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CHD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -413bp_to_uc010bof.1_5end |
EntrezGene: | CHD2 |
HGNC: | 1917 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.28e-18 | 136 |
classical monocyte | 3.65e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.65e-16 | 42 |
hematopoietic lineage restricted progenitor cell | 1.65e-14 | 120 |
nongranular leukocyte | 2.74e-14 | 115 |
myeloid leukocyte | 5.36e-14 | 72 |
hematopoietic stem cell | 5.50e-14 | 168 |
hematopoietic oligopotent progenitor cell | 7.75e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.75e-14 | 161 |
defensive cell | 1.30e-13 | 48 |
phagocyte | 1.30e-13 | 48 |
hematopoietic cell | 8.01e-13 | 177 |
macrophage dendritic cell progenitor | 4.52e-11 | 61 |
granulocyte monocyte progenitor cell | 6.48e-11 | 67 |
monopoietic cell | 4.56e-10 | 59 |
monocyte | 4.56e-10 | 59 |
monoblast | 4.56e-10 | 59 |
promonocyte | 4.56e-10 | 59 |
myeloid lineage restricted progenitor cell | 9.86e-10 | 66 |
myeloid cell | 1.21e-09 | 108 |
common myeloid progenitor | 1.21e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.37e-09 | 82 |
bone marrow | 4.13e-09 | 76 |
hematopoietic system | 6.38e-09 | 98 |
blood island | 6.38e-09 | 98 |
skeletal element | 5.54e-08 | 90 |
hemolymphoid system | 1.23e-07 | 108 |
atrioventricular valve | 4.95e-07 | 2 |
skeletal system | 9.48e-07 | 100 |