FFCP PHASE1:Hg19::chr17:38174999..38175001,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:38174999..38175001,+
|short_description=p8@CASC3
|description=CAGE_peak_8_at_CASC3_5end
|association_with_transcript=-426bp_to_AK296682_5end
|EntrezGene=...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22794 | |EntrezGene=22794 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17040 | |HGNC=17040 | ||
|TSSclassifier=strong | |||
|UniProt=B4DKR6 | |UniProt=B4DKR6 | ||
|association_with_transcript=-426bp_to_AK296682_5end | |||
|cluster_id=chr17:38174999..38175001,+ | |||
|description=CAGE_peak_8_at_CASC3_5end | |||
|id=chr17:38174999..38175001,+ | |||
|ontology_enrichment_celltype=CL:0002551!3.30e-17!6;CL:0000188!8.15e-10!9;CL:0000055!4.94e-07!180;CL:0002321!9.79e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000346;9.09e-34;3!CL:1000428;9.09e-34;3!CL:0002559;9.92e-21;5!CL:0002621;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,5.51e-34,3;CL:1000428,5.51e-34,3;CL:0002559,7.35e-21,5;CL:0002621,1.67e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;2.15e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,2.16e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0002067!4.26e-20!9;UBERON:0004016!4.26e-20!9;UBERON:0010083!4.26e-20!9;UBERON:0000486!3.22e-13!82;UBERON:0000914!8.76e-13!83;UBERON:0002329!8.76e-13!83;UBERON:0003077!8.76e-13!83;UBERON:0003059!8.76e-13!83;UBERON:0007282!8.76e-13!83;UBERON:0009618!8.76e-13!83;UBERON:0007285!8.76e-13!83;UBERON:0004290!4.17e-12!70;UBERON:0000119!4.35e-07!312;UBERON:0002100!4.52e-07!216;UBERON:0003104!9.96e-07!238;UBERON:0009142!9.96e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;9.09e-34;3!UBERON:0001992;9.09e-34;3!UBERON:0002067;2.47e-25;9!UBERON:0002073;9.92e-21;5!UBERON:0001949;1.41e-09;3!UBERON:0004923;8.44e-08;55!UBERON:0001003;1.44e-07;15!UBERON:0007376;1.44e-07;15!UBERON:0010371;2.56e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,5.51e-34,3;UBERON:0001992,5.51e-34,3;UBERON:0002067,1.50e-25,9;UBERON:0004016,1.50e-25,9;UBERON:0010083,1.50e-25,9;UBERON:0002073,7.35e-21,5;UBERON:0005086,7.35e-21,5;UBERON:0001949,1.67e-09,3;UBERON:0000486,1.06e-07,83;UBERON:0001003,1.31e-07,15;UBERON:0007376,1.31e-07,15;UBERON:0007383,1.31e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.0892997282840798,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,1.71141546463335,0.149448680551801,0.822041490506354,0.647491777472526,0.842704840213491,0,0.368502951935304,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,1.09098448236334,0.286804595389004,0.243947412259191,0,0.116193942869518,0,0.504641701751257,0,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0,0.511359764496605,0,0,0,0,0,0,0,0,1.23213432070436,0.532306030317022,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33570446027487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7614397042404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.0892997282840798,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,1.71141546463335,0.149448680551801,0.822041490506354,0.647491777472526,0.842704840213491,0,0.368502951935304,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,1.09098448236334,0.286804595389004,0.243947412259191,0,0.116193942869518,0,0.504641701751257,0,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0,0.511359764496605,0,0,0,0,0,0,0,0,1.23213432070436,0.532306030317022,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33570446027487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7614397042404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@CASC3 | |||
}} | }} |
Latest revision as of 23:39, 19 September 2015
Short description: | p8@CASC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CASC3_5end |
Coexpression cluster: | NA |
Association with transcript: | -426bp_to_AK296682_5end |
EntrezGene: | CASC3 |
HGNC: | 17040 |
UniProt: | B4DKR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 5.51e-34 | 3 |
stem cell of epidermis | 5.51e-34 | 3 |
hair follicle cell | 7.35e-21 | 5 |
gingival epithelial cell | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 5.51e-34 | 3 |
papillary layer of dermis | 5.51e-34 | 3 |
dermis | 1.50e-25 | 9 |
dermatome | 1.50e-25 | 9 |
future dermis | 1.50e-25 | 9 |
hair follicle | 7.35e-21 | 5 |
hair follicle placode | 7.35e-21 | 5 |
gingival epithelium | 1.67e-09 | 3 |
multilaminar epithelium | 1.06e-07 | 83 |
skin epidermis | 1.31e-07 | 15 |
outer epithelium | 1.31e-07 | 15 |
enveloping layer of ectoderm | 1.31e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 2.16e-26 | 1 |