FFCP PHASE1:Hg19::chr17:38179565..38179597,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9862 | |EntrezGene=9862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22963 | |HGNC=22963 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=162bp_to_ENST00000492176_5end | |association_with_transcript=162bp_to_ENST00000492176_5end | ||
|cluster_id=chr17:38179565..38179597,- | |||
|coexpression_cluster_id=C1399 | |||
|description=CAGE_peak_4_at_MED24_5end | |description=CAGE_peak_4_at_MED24_5end | ||
|id=chr17:38179565..38179597,- | |id=chr17:38179565..38179597,- | ||
|ontology_enrichment_celltype=CL:0002368!2.43e-14!13;CL:0002202!4.83e-09!9;CL:0002632!4.83e-09!9;CL:0002076!1.14e-07!43 | |ontology_enrichment_celltype=CL:0002368!2.43e-14!13;CL:0002202!4.83e-09!9;CL:0002632!4.83e-09!9;CL:0002076!1.14e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.83e-28;13!CL:0002202;3.81e-19;9!CL:0002632;3.81e-19;9!CL:0000307;2.03e-15;3!CL:0002328;2.13e-15;3!CL:0002076;7.08e-12;42!CL:0000575;5.55e-10;2!CL:0002159;1.41e-07;14!CL:0002138;1.67e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.02e-28,13;CL:0002202,3.82e-19,9;CL:0002632,3.82e-19,9;CL:0002076,3.53e-16,42;CL:0000068,2.03e-15,3;CL:0000069,2.03e-15,3;CL:0000307,2.03e-15,3;CL:0000377,2.03e-15,3;CL:0002328,2.13e-15,3;CL:0000223,6.33e-11,58;CL:0000575,6.36e-10,2;CL:0000066,1.95e-09,253;CL:0002159,1.59e-07,14;CL:0005020,1.79e-07,6;CL:0002138,1.79e-07,6;CL:0005022,1.79e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000377;2.03e-15;3!CL:0005022;1.67e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.07e-11!72;UBERON:0004119!1.68e-11!169;UBERON:0000925!1.68e-11!169;UBERON:0006595!1.68e-11!169;UBERON:0007196!9.72e-11!14;UBERON:0001558!9.72e-11!14;UBERON:0000065!6.31e-10!53;UBERON:0005178!9.47e-10!34;UBERON:0002224!9.47e-10!34;UBERON:0005181!2.50e-09!35;UBERON:0000915!4.42e-09!52;UBERON:0003126!7.46e-09!7;UBERON:0001005!7.46e-09!7;UBERON:0001007!2.92e-08!155;UBERON:0001555!2.92e-08!155;UBERON:0007026!2.92e-08!155;UBERON:0000464!1.29e-07!104;UBERON:0004921!3.39e-07!129;UBERON:0004185!3.39e-07!129;UBERON:0008947!3.66e-07!38;UBERON:0003258!3.66e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;2.80e-19;15!UBERON:0001558;2.80e-19;15!UBERON:0003126;7.57e-17;7!UBERON:0001005;7.57e-17;7!UBERON:0004815;2.13e-15;3!UBERON:0002031;2.13e-15;3!UBERON:0005178;5.21e-13;34!UBERON:0002224;5.21e-13;34!UBERON:0000065;2.15e-12;44!UBERON:0005181;2.14e-11;35!UBERON:0003127;4.95e-10;2!UBERON:0000072;6.03e-10;37!UBERON:0006562;1.70e-09;2!UBERON:0002185;2.07e-09;5!UBERON:0001004;1.48e-08;65!UBERON:0000915;3.90e-08;52!UBERON:0002465;1.99e-07;10!UBERON:0001044;2.16e-07;6!UBERON:0003293;2.16e-07;6!UBERON:0003294;2.16e-07;6!UBERON:0010047;2.16e-07;6!UBERON:0003408;2.16e-07;6!UBERON:0000167;2.16e-07;6!UBERON:0002048;5.26e-07;22!UBERON:0000117;5.26e-07;22!UBERON:0000171;5.26e-07;22!UBERON:0000170;5.26e-07;22!UBERON:0004807;5.69e-07;22!UBERON:0000485;7.98e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,2.71e-19,15;UBERON:0001558,2.71e-19,15;UBERON:0001004,5.53e-18,74;UBERON:0003126,7.22e-17,7;UBERON:0001005,7.22e-17,7;UBERON:0000065,7.71e-16,54;UBERON:0004815,2.13e-15,3;UBERON:0002031,2.13e-15,3;UBERON:0005178,2.15e-14,34;UBERON:0002224,2.15e-14,34;UBERON:0005181,6.44e-14,35;UBERON:0008947,1.22e-12,38;UBERON:0003258,1.22e-12,38;UBERON:0000915,3.34e-12,52;UBERON:0004119,8.93e-11,160;UBERON:0000925,8.93e-11,160;UBERON:0006595,8.93e-11,160;UBERON:0003127,4.63e-10,2;UBERON:0001041,6.60e-10,87;UBERON:0000072,1.03e-09,47;UBERON:0005157,1.22e-09,47;UBERON:0004921,1.62e-09,118;UBERON:0002185,2.07e-09,5;UBERON:0005153,1.40e-08,37;UBERON:0001007,6.19e-08,145;UBERON:0001555,6.19e-08,145;UBERON:0007026,6.19e-08,145;UBERON:0001044,1.83e-07,6;UBERON:0003293,1.83e-07,6;UBERON:0003294,1.83e-07,6;UBERON:0010047,1.83e-07,6;UBERON:0000167,1.83e-07,6;UBERON:0002465,2.11e-07,10;UBERON:0002048,5.57e-07,22;UBERON:0000117,5.57e-07,22;UBERON:0000171,5.57e-07,22;UBERON:0000170,5.57e-07,22;UBERON:0005597,5.57e-07,22;UBERON:0000118,5.57e-07,22 | |||
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|short_description=p4@MED24 | |short_description=p4@MED24 | ||
}} | }} |
Latest revision as of 23:40, 19 September 2015
Short description: | p4@MED24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MED24_5end |
Coexpression cluster: | C1399_Bronchial_Tracheal_bronchial_Lymphatic_salivary_Small_lung |
Association with transcript: | 162bp_to_ENST00000492176_5end |
EntrezGene: | MED24 |
HGNC: | 22963 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.02e-28 | 13 |
epithelial cell of tracheobronchial tree | 3.82e-19 | 9 |
epithelial cell of lower respiratory tract | 3.82e-19 | 9 |
endo-epithelial cell | 3.53e-16 | 42 |
duct epithelial cell | 2.03e-15 | 3 |
branched duct epithelial cell | 2.03e-15 | 3 |
tracheal epithelial cell | 2.03e-15 | 3 |
tracheoblast | 2.03e-15 | 3 |
bronchial epithelial cell | 2.13e-15 | 3 |
endodermal cell | 6.33e-11 | 58 |
corneal epithelial cell | 6.36e-10 | 2 |
epithelial cell | 1.95e-09 | 253 |
general ecto-epithelial cell | 1.59e-07 | 14 |
lymphangioblast | 1.79e-07 | 6 |
endothelial cell of lymphatic vessel | 1.79e-07 | 6 |
vascular lymphangioblast | 1.79e-07 | 6 |