FFCP PHASE1:Hg19::chr12:6643676..6643693,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:6643676..6643693,+
|short_description=p1@GAPDH
|description=CAGE_peak_1_at_GAPDH_5end
|association_with_transcript=0bp_to_ENST00000450282,ENST00000496049_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2597 | |EntrezGene=2597 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4141 | |HGNC=4141 | ||
|TSSclassifier=strong | |||
|UniProt=E7EU54 | |UniProt=E7EU54 | ||
|association_with_transcript=0bp_to_ENST00000450282,ENST00000496049_5end | |||
|cluster_id=chr12:6643676..6643693,+ | |||
|description=CAGE_peak_1_at_GAPDH_5end | |||
|id=chr12:6643676..6643693,+ | |||
|ontology_enrichment_celltype=CL:0000548!4.21e-30!679;CL:0000004!4.21e-30!679;CL:0000255!4.21e-30!679;CL:0000012!7.69e-30!682;CL:0000144!1.06e-21!625;CL:0002371!2.09e-18!591;CL:0000003!4.08e-17!722;CL:0000055!4.92e-15!180;CL:0000220!7.41e-14!246;CL:0002321!1.33e-13!248;CL:0000192!4.01e-12!42;CL:0000514!4.01e-12!42;CL:0000183!1.15e-11!59;CL:0000680!1.31e-11!57;CL:0000056!1.31e-11!57;CL:0000355!1.31e-11!57;CL:0000066!3.10e-11!254;CL:0000359!4.44e-11!32;CL:0000187!1.17e-10!54;CL:0000063!2.12e-10!578;CL:0000393!4.46e-10!60;CL:0000211!4.46e-10!60;CL:0000222!7.25e-10!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.25e-10;32!CL:0000192;1.60e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.41e-13,250;CL:0000066,1.81e-11,253;CL:0000192,1.92e-11,43;CL:0000514,1.92e-11,43;CL:0000359,4.44e-11,32;CL:0000680,4.57e-11,58;CL:0000056,4.57e-11,58;CL:0000355,4.57e-11,58;CL:0000187,3.94e-10,55;CL:0000222,8.72e-10,121;CL:0000393,1.33e-09,61;CL:0000211,1.33e-09,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.60e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.17e-12!83;UBERON:0002329!1.17e-12!83;UBERON:0003077!1.17e-12!83;UBERON:0003059!1.17e-12!83;UBERON:0007282!1.17e-12!83;UBERON:0009618!1.17e-12!83;UBERON:0007285!1.17e-12!83;UBERON:0004290!1.27e-12!70;UBERON:0001134!1.39e-12!61;UBERON:0002036!1.39e-12!61;UBERON:0003082!1.39e-12!61;UBERON:0000486!6.08e-12!82;UBERON:0002385!1.76e-11!63;UBERON:0001015!1.76e-11!63;UBERON:0000383!1.76e-11!63;UBERON:0005256!3.37e-10!143;UBERON:0001637!5.42e-10!42;UBERON:0003509!5.42e-10!42;UBERON:0004572!5.42e-10!42;UBERON:0000055!6.34e-09!69;UBERON:0002049!6.41e-09!79;UBERON:0007798!6.41e-09!79;UBERON:0000490!1.42e-08!138;UBERON:0001981!2.53e-08!60;UBERON:0007500!2.53e-08!60;UBERON:0004537!2.53e-08!60;UBERON:0006965!2.53e-08!60;UBERON:0004872!5.52e-08!84;UBERON:0003104!7.36e-08!238;UBERON:0009142!7.36e-08!238;UBERON:0001737!2.74e-07!9;UBERON:0003914!3.54e-07!118;UBERON:0002100!3.98e-07!216;UBERON:0004573!5.42e-07!33;UBERON:0004571!5.42e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.74e-07;9!UBERON:0001557;2.74e-07;9!UBERON:0001637;8.47e-07;42!UBERON:0003509;8.47e-07;42!UBERON:0004572;8.47e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.57e-13,78;UBERON:0002329,4.10e-12,71;UBERON:0003059,4.10e-12,71;UBERON:0007282,4.10e-12,71;UBERON:0004290,4.10e-12,71;UBERON:0009618,4.10e-12,71;UBERON:0001134,4.96e-12,62;UBERON:0002036,4.96e-12,62;UBERON:0003082,4.96e-12,62;UBERON:0003077,1.36e-11,72;UBERON:0007285,1.36e-11,72;UBERON:0000486,1.69e-11,83;UBERON:0007524,2.09e-11,73;UBERON:0002385,5.65e-11,64;UBERON:0001015,5.65e-11,64;UBERON:0000383,5.65e-11,64;UBERON:0001637,5.42e-10,42;UBERON:0003509,5.42e-10,42;UBERON:0004572,5.42e-10,42;UBERON:0000055,8.92e-09,68;UBERON:0002049,8.99e-09,78;UBERON:0007798,8.99e-09,78;UBERON:0000490,9.12e-09,148;UBERON:0005256,1.14e-08,122;UBERON:0007500,3.55e-08,59;UBERON:0001981,3.55e-08,59;UBERON:0004537,3.55e-08,59;UBERON:0006965,3.55e-08,59;UBERON:0004872,7.66e-08,83;UBERON:0003104,1.42e-07,160;UBERON:0009142,1.42e-07,160;UBERON:0003914,1.95e-07,117;UBERON:0001737,2.74e-07,9;UBERON:0002100,5.33e-07,199;UBERON:0004573,5.42e-07,33;UBERON:0004571,5.42e-07,33 | |||
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| ||
|short_description=p1@GAPDH | |||
}} | }} |
Latest revision as of 23:46, 19 September 2015
Short description: | p1@GAPDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GAPDH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000450282, ENST00000496049_5end |
EntrezGene: | GAPDH |
HGNC: | 4141 |
UniProt: | E7EU54 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.41e-13 | 250 |
epithelial cell | 1.81e-11 | 253 |
smooth muscle cell | 1.92e-11 | 43 |
smooth muscle myoblast | 1.92e-11 | 43 |
vascular associated smooth muscle cell | 4.44e-11 | 32 |
muscle precursor cell | 4.57e-11 | 58 |
myoblast | 4.57e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.57e-11 | 58 |
muscle cell | 3.94e-10 | 55 |
mesodermal cell | 8.72e-10 | 121 |
electrically responsive cell | 1.33e-09 | 61 |
electrically active cell | 1.33e-09 | 61 |