FFCP PHASE1:Hg19::chr3:99509555..99509574,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1295 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2215 | |||
|TSSclassifier=strong | |||
|UniProt=P27658 | |||
|association_with_transcript=28bp_to_AB384777,BT009917,CU680628,DQ893873,X57527_5end | |||
|cluster_id=chr3:99509555..99509574,+ | |||
|coexpression_cluster_id=C1517 | |||
|description=CAGE_peak_3_at_COL8A1_5end | |||
|id=chr3:99509555..99509574,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.71e-17!180;CL:0000057!1.20e-14!75;CL:0002620!1.09e-08!23;CL:0002334!2.56e-08!12;CL:0000222!9.39e-08!119;CL:0000136!9.94e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;7.77e-13;13!CL:0002615;1.20e-11;3!CL:0002580;2.03e-11;3!CL:0002620;2.18e-10;23!CL:0002334;5.26e-10;12!CL:0002617;2.17e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.61e-16,76;CL:0000136,4.61e-14,15;CL:0002615,1.05e-11,3;CL:0002580,1.77e-11,3;CL:0002620,1.87e-10,23;CL:0002334,5.59e-10,12;CL:0002617,2.17e-08,2;CL:0000048,2.40e-07,427;CL:0000723,4.26e-07,433;CL:0000034,8.93e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.65e-07,5;DOID:450,9.65e-07,5;DOID:66,9.65e-07,5;DOID:423,9.65e-07,5;DOID:0080000,9.65e-07,5;DOID:11722,9.65e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.85e-10!45;UBERON:0002416!1.85e-10!45;UBERON:0002097!1.26e-09!40;UBERON:0003102!1.76e-09!95;UBERON:0003688!7.36e-08!6;UBERON:0002358!7.36e-08!6;UBERON:0003684!7.36e-08!6;UBERON:0001178!7.36e-08!6;UBERON:0000475!9.13e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.20e-14;6!UBERON:0002358;1.20e-14;6!UBERON:0003684;1.20e-14;6!UBERON:0001178;1.20e-14;6!UBERON:0004457;1.22e-09;9!UBERON:0000042;1.22e-09;9!UBERON:0002097;5.40e-09;41!UBERON:0000310;7.51e-09;10!UBERON:0005406;1.85e-08;2!UBERON:0001443;5.23e-08;11!UBERON:0002199;4.36e-07;46!UBERON:0002416;4.36e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.31e-14,6;UBERON:0002358,1.31e-14,6;UBERON:0003684,1.31e-14,6;UBERON:0001178,1.31e-14,6;UBERON:0002199,2.94e-11,46;UBERON:0002416,2.94e-11,46;UBERON:0002097,4.36e-11,41;UBERON:0000310,7.05e-09,10;UBERON:0005406,1.88e-08,2;UBERON:0001443,4.94e-08,11;UBERON:0004457,4.10e-07,12;UBERON:0000042,4.10e-07,12;UBERON:0003102,9.45e-07,99 | |||
|phase1_expression=3.08853244759946,14.9870366723688,2.67813367782345,14.0102617694383,9.38618298297304,13.9574163856059,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0.795285947051099,0.973269740605272,0.567208902984407,1.10864698731282,0.702678285545008,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,1.10047216776027,0.417989933073621,0.258416759169329,0,0,0,0,0.488124115096339,0,1.62028389576352,0.17859945656816,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0,0,0,0.560677600142307,0,0,0,0.67355336034844,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.309977343527296,2.37600571456411,3.95627086845691,0,0,0.168336113954066,0.125118519871964,0.554128230968366,0.438977620880838,2.75839016219118,1.05166641234618,0.113432183160021,3.40840307808838,2.34913127700424,1.90738711043606,0.900273288253207,0.721367704669072,4.63752972082133,2.04728541964749,0.168776332241266,0.194874010322397,1.7670364197088,1.56484827691909,0.161646056818812,11.7153165530483,2.11579406278045,0,0,0,0,0,0,0,0,0,0,1.56449532329816,1.92972281457866,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0.288732895522148,0,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,1.74306691720059,2.19940580600526,0,0,0,1.19812427745791,2.29723871668228,0,2.31650090668127,3.08214483825575,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.813795071099207,0.623912584592421,0.892144943985809,0.157702415033935,0.117141414992713,0.902838299183157,18.1926003244788,1.03473071292505,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,2.48107807818777,3.6830873589135,5.05188169979532,0.512556597022804,3.07024349440022,1.28683136914886,4.45254199334973,0.308419387605311,0.177561725313127,0,0.519254429183621,0,0,0,0,0.114814448164607,0.728364672026868,0.655622074797121,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0,0,0.574265537996172,0,0,0,0,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.178064071293475,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,1.71749864090389,0,1.89827654831236,2.47819252100972,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0.731140468893853,1.05650146756755,0.545999645631943,0.565621727814851,0,0,0,4.38450885253763,0,0,0.608731130888112,0.30982349809975,0.281695602532241,0.143411352204052,0.294747123039363,0.35667105148125,0,0,0.329294892959902,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0,0,0,0,4.66559381492711,0.269605053441981,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,1.4655614944298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0.596143835108969,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0.135904206073614,0.418411385249333,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0.429226048136571,0.223171457441873,0,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,1.79287339332845,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0.851940108927109,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.124192805882767,0,0.124980407962107,0,0,0,0.468334905806882,0,0,0.233713309847224,0,0.189403005275089,0.50313580350515,0,0.228840068396924,0,0.15543720058278,0,0.796483835818512,0,0.310525913752519,0.414706207840855,0,0.521745061811734,0.300515217994437,1.14241563650639,0.406870733204662,0.363697318405119,0.537052785212442,0,2.3885753321917,4.80033317595784,1.37358282073117,0.336749488765919,0,0,0,0,0,0.463044948647668,0.734210113519403,0.179088841081487,0,0,0,0.38582807654183,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,1.37190407549935,0,0,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2679671827502,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09194519983426,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0.2380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| |||
|short_description=p3@COL8A1 | |||
}} |
Latest revision as of 00:00, 20 September 2015
Short description: | p3@COL8A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COL8A1_5end |
Coexpression cluster: | C1517_Fibroblast_Preadipocyte_Adipocyte_basal_bone_Osteoblast_pleomorphic |
Association with transcript: | 28bp_to_AB384777, BT009917, CU680628, DQ893873, X57527_5end |
EntrezGene: | COL8A1 |
HGNC: | 2215 |
UniProt: | P27658 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.61e-16 | 76 |
fat cell | 4.61e-14 | 15 |
adipocyte of omentum tissue | 1.05e-11 | 3 |
preadipocyte of the breast | 1.77e-11 | 3 |
skin fibroblast | 1.87e-10 | 23 |
preadipocyte | 5.59e-10 | 12 |
adipocyte of breast | 2.17e-08 | 2 |
multi fate stem cell | 2.40e-07 | 427 |
somatic stem cell | 4.26e-07 | 433 |
stem cell | 8.93e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.31e-14 | 6 |
peritoneum | 1.31e-14 | 6 |
abdominal cavity | 1.31e-14 | 6 |
visceral peritoneum | 1.31e-14 | 6 |
integument | 2.94e-11 | 46 |
integumental system | 2.94e-11 | 46 |
skin of body | 4.36e-11 | 41 |
breast | 7.05e-09 | 10 |
perirenal fat | 1.88e-08 | 2 |
chest | 4.94e-08 | 11 |
cavity lining | 4.10e-07 | 12 |
serous membrane | 4.10e-07 | 12 |
surface structure | 9.45e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.65e-07 | 5 |
myotonic disease | 9.65e-07 | 5 |
muscle tissue disease | 9.65e-07 | 5 |
myopathy | 9.65e-07 | 5 |
muscular disease | 9.65e-07 | 5 |
myotonic dystrophy | 9.65e-07 | 5 |